←Back to structures
SRR1747044_scaffold_0_prodigal-single.1__X__X__00264
Bact-VirSRR1747044_scaffold_0_prodigal-single.1__X__X__00264
Identity
- Kingdom:
- phage
Quality
75.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-59
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wzoA01 | 2.30.30.370 | Mainly Beta › Roll › SH3 type barrels. › FAH | 0.75 | 49.0 | 5.60e-01 | 86.4% | 100.0% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 54.0 | 5.25e-01 | 94.9% | 78.8% |
| 3pp2A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 49.0 | 4.07e-01 | 91.5% | 84.8% |
| 1btkA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 50.0 | 3.70e-01 | 91.5% | 65.0% |
| 2yh9B00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.61 | 32.0 | 3.08e-01 | 96.6% | 42.6% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.61 | 47.0 | 4.59e-01 | 89.8% | 86.6% |
| 1f39A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.59 | 45.0 | 3.83e-01 | 89.8% | 49.5% |
| 2p1gA02 | 2.30.260.10 | Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain | 0.58 | 45.0 | 3.82e-01 | 84.7% | 66.0% |
| 2dhkA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 48.0 | 4.11e-01 | 94.9% | 82.0% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 43.0 | 4.24e-01 | 84.7% | 82.5% |
| 6ijfC01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.56 | 45.0 | 3.92e-01 | 89.8% | 93.5% |
| 4bi3A01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.56 | 44.0 | 3.85e-01 | 88.1% | 94.5% |
| 4fcaA01 | 2.60.120.1250 | Mainly Beta › Sandwich › Jelly Rolls › Peptidase M60, enhancin-like domain 1 | 0.56 | 40.0 | 3.30e-01 | 96.6% | 41.3% |
| 3tfmA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 42.0 | 3.75e-01 | 89.8% | 88.9% |
| 7t8tA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 44.0 | 3.58e-01 | 98.3% | 82.4% |
| 3r5lA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 45.0 | 3.70e-01 | 96.6% | 58.6% |
| 3jcuO01 | 2.40.160.30 | Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor | 0.54 | 42.0 | 3.16e-01 | 91.5% | 94.3% |
| 3i2dA01 | 2.60.120.780 | Mainly Beta › Sandwich › Jelly Rolls › PINIT domain | 0.53 | 45.0 | 3.36e-01 | 96.6% | 65.2% |
| 2w5eA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 39.0 | 3.65e-01 | 81.4% | 63.5% |
| 3eesA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.53 | 43.0 | 3.42e-01 | 94.9% | 72.5% |
| 2rovA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 42.0 | 3.51e-01 | 96.6% | 85.5% |
| 5bncB01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 42.0 | 3.22e-01 | 94.9% | 45.0% |
| 3db0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 41.0 | 3.23e-01 | 88.1% | 46.8% |
| 2iabA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 42.0 | 3.28e-01 | 98.3% | 44.8% |
| 1e2tA03 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.50 | 40.0 | 3.34e-01 | 93.2% | 82.1% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3251420 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 55.0 | 4.83e-01 | 93.2% | 75.6% |
| 3590468 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 56.0 | 5.32e-01 | 94.9% | 81.4% |
| 4251101 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 53.0 | 4.77e-01 | 94.9% | 80.0% |
| 5080336 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 49.0 | 4.86e-01 | 89.8% | 84.4% |
| 3607885 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 49.0 | 4.25e-01 | 89.8% | 88.4% |
| 3699577 | 220.1.1.236 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_27 | 0.61 | 48.0 | 3.99e-01 | 88.1% | 69.1% |
| 3954254 | 4.1.1.387 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Rv0428c | 0.61 | 49.0 | 4.84e-01 | 91.5% | 90.8% |
| 3993809 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.61 | 48.0 | 3.66e-01 | 91.5% | 56.8% |
| 4986631 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.60 | 41.0 | 3.00e-01 | 71.2% | 39.4% |
| 4110878 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 42.0 | 4.58e-01 | 74.6% | 100.0% |
| 4514731 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 47.0 | 4.24e-01 | 91.5% | 61.2% |
| 3178261 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.59 | 48.0 | 3.84e-01 | 91.5% | 68.8% |
| 3934278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 50.0 | 4.10e-01 | 98.3% | 56.5% |
| 3930197 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 50.0 | 4.17e-01 | 93.2% | 60.0% |
| 3728679 | 6.1.1.37 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › DUF7908 | 0.59 | 48.0 | 3.81e-01 | 94.9% | 98.5% |
| 3947087 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.58 | 49.0 | 3.70e-01 | 100.0% | 89.4% |
| 3516333 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 44.0 | 4.57e-01 | 86.4% | 90.9% |
| 3241890 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 46.0 | 3.90e-01 | 89.8% | 62.0% |
| 3777599 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 44.0 | 3.52e-01 | 91.5% | 77.9% |
| 3275146 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.56 | 45.0 | 3.96e-01 | 94.9% | 58.9% |
| 3976351 | 219.1.1.40 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AmiA-like | 0.55 | 44.0 | 3.03e-01 | 93.2% | 90.8% |
| 5003054 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.55 | 36.0 | 2.83e-01 | 96.6% | 29.6% |
| 3869553 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.54 | 42.0 | 3.38e-01 | 91.5% | 74.8% |
| 4007473 | 10.12.1.115 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PF30437 | 0.53 | 43.0 | 3.41e-01 | 94.9% | 42.2% |
| 4946849 | 1.1.5.15 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red | 0.53 | 44.0 | 3.22e-01 | 94.9% | 34.7% |
| 3358121 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.53 | 43.0 | 3.17e-01 | 98.3% | 59.3% |
| 3478678 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 41.0 | 3.87e-01 | 89.8% | 100.0% |
| 3801890 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.52 | 43.0 | 3.04e-01 | 94.9% | 30.5% |
| 3283478 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.52 | 44.0 | 3.31e-01 | 96.6% | 44.7% |
| 168216 | 220.1.1.151 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MRCK | 0.52 | 42.0 | 3.51e-01 | 96.6% | 85.5% |
| 3400447 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 43.0 | 2.91e-01 | 93.2% | 55.6% |
| 3425128 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.52 | 41.0 | 3.10e-01 | 96.6% | 53.3% |
| 3898198 | 220.1.1.184 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP | 0.52 | 40.0 | 3.35e-01 | 93.2% | 76.8% |
| 3103203 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.51 | 40.0 | 3.63e-01 | 93.2% | 61.1% |
| 1807410 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.51 | 40.0 | 3.52e-01 | 91.5% | 95.9% |
| 3227081 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 38.0 | 3.59e-01 | 88.1% | 81.2% |
| 161810 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.51 | 42.0 | 3.22e-01 | 98.3% | 41.8% |
| 3273204 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.50 | 39.0 | 3.42e-01 | 93.2% | 55.8% |