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SRR1747045_scaffold_1_prodigal-single.1__X__X__00038
Bact-VirSRR1747045_scaffold_1_prodigal-single.1__X__X__00038
Identity
- Kingdom:
- phage
Quality
63.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-95
Domain cluster:
rep: pre3_saliva_scaffold_7_prodigal-single.1__X__X__00232__D3-81
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03477.22 best | ATP-cone | 74.5 | 1.10e-20 | 93.5% | 97.7% |
D2
high
residues 97-170
Domain cluster:
rep: pig_ID_3640_F65_scaffold_23_curated_prodigal-single.1__X__X__00063__D112-182
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13597.12 best | NRDD | 46.4 | 3.60e-12 | 73.0% | 9.3% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qdmA03 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.64 | 43.0 | 4.27e-01 | 100.0% | 66.2% |
| 2ogwA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.55 | 36.0 | 2.81e-01 | 73.0% | 33.1% |
| 4ai4A00 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.55 | 41.0 | 3.10e-01 | 79.7% | 67.7% |
| 4fzlA01 | 1.10.150.790 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.55 | 44.0 | 4.24e-01 | 90.5% | 95.4% |
| 3qybA03 | 1.10.472.80 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3 | 0.54 | 46.0 | 3.93e-01 | 100.0% | 67.4% |
| 3vkgA09 | 1.20.920.30 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.53 | 46.0 | 3.77e-01 | 100.0% | 91.0% |
| 6tqpA01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.52 | 38.0 | 3.18e-01 | 79.7% | 89.7% |
| 3qybA02 | 1.10.8.270 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › putative rabgap domain of human tbc1 domain family member 14 like domains | 0.51 | 44.0 | 4.14e-01 | 98.6% | 78.5% |
| 2y0nC00 | 1.10.274.30 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › MRG domain | 0.50 | 43.0 | 3.39e-01 | 98.6% | 57.3% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4934728 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.89 | 79.0 | 4.54e-01 | 94.6% | 20.3% |
| 5079907 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.81 | 71.0 | 4.11e-01 | 94.6% | 19.4% |
| 3949156 | 2500.1.1.7 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Gly_radical, NRDD | 0.80 | 73.0 | 4.22e-01 | 100.0% | 20.5% |
| 4974476 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.80 | 70.0 | 4.01e-01 | 94.6% | 18.9% |
| 5037353 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.80 | 72.0 | 4.15e-01 | 97.3% | 19.3% |
| 3978395 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.80 | 72.0 | 4.21e-01 | 100.0% | 20.5% |
| 4961008 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.79 | 68.0 | 3.96e-01 | 93.2% | 19.7% |
| 5004456 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.79 | 71.0 | 4.11e-01 | 100.0% | 19.3% |
| 4954935 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.79 | 68.0 | 3.91e-01 | 93.2% | 18.4% |
| 5048774 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.79 | 68.0 | 3.96e-01 | 94.6% | 20.2% |
| 4976938 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.76 | 65.0 | 3.78e-01 | 94.6% | 19.4% |
| 5074578 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.72 | 64.0 | 3.75e-01 | 98.6% | 20.2% |
| 5053026 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.71 | 63.0 | 3.77e-01 | 98.6% | 23.5% |
| 4987959 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.69 | 62.0 | 3.67e-01 | 97.3% | 21.0% |
| 4994565 | 2500.1.1.5 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › NRDD | 0.63 | 55.0 | 3.40e-01 | 98.6% | 24.7% |
| 4997312 | 3396.1.1.0 ↗ | extended segments › HIG1 domain family member 1A › HIG1 domain family member 1A › HIG1 domain family member 1A | 0.63 | 41.0 | 3.97e-01 | 70.3% | 58.8% |
| 4934859 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.63 | 54.0 | 3.35e-01 | 95.9% | 22.6% |
| 3593798 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.61 | 49.0 | 3.79e-01 | 87.8% | 76.4% |
| 3602479 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.59 | 44.0 | 3.34e-01 | 79.7% | 91.9% |
| 3798156 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.57 | 49.0 | 3.68e-01 | 98.6% | 79.5% |
| 3515233 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 41.0 | 2.99e-01 | 79.7% | 42.5% |
| 3479045 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.55 | 45.0 | 4.12e-01 | 94.6% | 83.8% |
| 3403706 | 195.1.1.0 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like | 0.52 | 40.0 | 3.50e-01 | 86.5% | 62.5% |
| 5078700 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.50 | 43.0 | 3.00e-01 | 100.0% | 73.8% |
D3
high
residues 314-385
Domain cluster:
rep: HQ317390.1__AFK66689.1__COPG_00093__00093__D5-82
CATH (54)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ln0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.77 | 68.0 | 6.30e-01 | 100.0% | 87.0% |
| 5ja1B00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.75 | 48.0 | 5.00e-01 | 100.0% | 71.2% |
| 2ou5A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.71 | 51.0 | 3.81e-01 | 75.0% | 38.3% |
| 1yleA02 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.68 | 48.0 | 5.07e-01 | 75.0% | 83.1% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.68 | 56.0 | 5.50e-01 | 93.1% | 85.5% |
| 1ltlA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.66 | 44.0 | 5.03e-01 | 77.8% | 100.0% |
| 1yd0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.66 | 56.0 | 5.26e-01 | 100.0% | 76.4% |
| 4me3A03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.65 | 46.0 | 5.12e-01 | 77.8% | 100.0% |
| 3r8qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 42.0 | 3.97e-01 | 84.7% | 54.4% |
| 3lqmA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 42.0 | 3.80e-01 | 90.3% | 48.0% |
| 1a8pA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 45.0 | 4.21e-01 | 76.4% | 66.3% |
| 4pofA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.64 | 43.0 | 4.98e-01 | 76.4% | 100.0% |
| 3r5lA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 51.0 | 4.36e-01 | 87.5% | 81.0% |
| 2zl7A02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.63 | 44.0 | 4.09e-01 | 77.8% | 57.1% |
| 3ec6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 51.0 | 4.20e-01 | 87.5% | 66.4% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 44.0 | 3.98e-01 | 75.0% | 69.5% |
| 5mj6A03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 40.0 | 3.89e-01 | 79.2% | 58.7% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.62 | 42.0 | 4.40e-01 | 79.2% | 77.3% |
| 1aw8B00 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.62 | 42.0 | 3.99e-01 | 76.4% | 57.1% |
| 2i51B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 49.0 | 3.62e-01 | 87.5% | 56.0% |
| 2v3sA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.61 | 43.0 | 3.91e-01 | 73.6% | 100.0% |
| 3q8pB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.61 | 44.0 | 3.91e-01 | 77.8% | 63.9% |
| 2hq7B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 48.0 | 3.87e-01 | 87.5% | 64.1% |
| 4kncA02 | 2.60.120.1380 | Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module | 0.60 | 43.0 | 3.73e-01 | 79.2% | 47.9% |
| 7vt4A01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.59 | 41.0 | 3.40e-01 | 76.4% | 40.6% |
| 2eddA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 39.0 | 3.46e-01 | 90.3% | 44.6% |
| 1jx4A04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.58 | 42.0 | 3.87e-01 | 77.8% | 63.3% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.58 | 43.0 | 3.93e-01 | 79.2% | 64.6% |
| 2xnjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 47.0 | 4.19e-01 | 90.3% | 70.2% |
| 2b39A10 | 2.60.120.1540 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 37.0 | 3.19e-01 | 79.2% | 40.5% |
| 3hrzC01 | 2.20.210.20 | Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › | 0.58 | 37.0 | 4.23e-01 | 79.2% | 95.9% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.58 | 42.0 | 3.60e-01 | 79.2% | 58.3% |
| 3ir9A02 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.57 | 47.0 | 3.96e-01 | 88.9% | 69.2% |
| 1zc1A01 | 2.40.40.50 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › Ubiquitin fusion degradation protein UFD1, N-terminal domain | 0.57 | 47.0 | 4.21e-01 | 94.4% | 64.1% |
| 6j0qA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.57 | 42.0 | 3.76e-01 | 81.9% | 54.1% |
| 3loiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 37.0 | 2.85e-01 | 80.6% | 30.0% |
| 4dohE02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 44.0 | 3.90e-01 | 84.7% | 63.2% |
| 2v5yA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 43.0 | 3.92e-01 | 90.3% | 62.1% |
| 6hj2A00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.56 | 41.0 | 2.81e-01 | 79.2% | 72.6% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.55 | 40.0 | 3.54e-01 | 77.8% | 53.2% |
| 2xzm600 | 2.20.25.100 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Ribosomal protein S27 | 0.55 | 39.0 | 3.78e-01 | 75.0% | 68.8% |
| 1fgyA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 39.0 | 3.32e-01 | 76.4% | 80.2% |
| 3kalB05 | 3.30.1490.50 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Glutathione synthase lid domain | 0.55 | 33.0 | 3.68e-01 | 90.3% | 76.3% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.54 | 40.0 | 3.56e-01 | 80.6% | 59.6% |
| 6z9cA01 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.54 | 40.0 | 3.37e-01 | 79.2% | 48.4% |
| 4d0qA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 40.0 | 3.10e-01 | 79.2% | 42.2% |
| 1yn3A00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 39.0 | 3.57e-01 | 79.2% | 88.8% |
| 3qvnA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.52 | 38.0 | 3.31e-01 | 90.3% | 48.7% |
| 5kycB02 | 2.20.210.10 | Mainly Beta › Single Sheet › ubp-family deubiquitinating enzyme fold › ubp-family deubiquitinating enzyme superfamily | 0.52 | 37.0 | 4.12e-01 | 79.2% | 100.0% |
| 8bs9A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 38.0 | 2.58e-01 | 80.6% | 25.3% |
| 1et9A01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 36.0 | 3.26e-01 | 76.4% | 88.2% |
| 4ksnA00 | 6.20.250.80 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.51 | 38.0 | 3.96e-01 | 79.2% | 93.8% |
| 2jvuA00 | 2.60.40.2290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 36.0 | 3.36e-01 | 84.7% | 56.1% |
| 4r9iA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.51 | 38.0 | 3.56e-01 | 87.5% | 64.0% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4344289 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.80 | 72.0 | 5.91e-01 | 100.0% | 64.6% |
| 5013669 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 54.0 | 5.15e-01 | 79.2% | 67.1% |
| 4996552 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.68 | 56.0 | 5.35e-01 | 93.1% | 76.5% |
| 3505201 | 1.1.3.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › UFD1_N1 | 0.68 | 47.0 | 5.25e-01 | 72.2% | 100.0% |
| 1141837 | 1.13.1.2 ↗ | beta barrels › cradle loop barrel › Arginine N-succinyltransferase alpha chain C-terminal domain › Arginine N-succinyltransferase alpha chain C-terminal domain › PF29831 | 0.68 | 48.0 | 5.04e-01 | 75.0% | 81.8% |
| 3440667 | 1.1.2.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › UFD1 | 0.68 | 48.0 | 5.08e-01 | 75.0% | 83.1% |
| 3256398 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 47.0 | 4.29e-01 | 90.3% | 56.8% |
| 3630527 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 49.0 | 5.19e-01 | 87.5% | 89.2% |
| 5000510 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.65 | 52.0 | 5.22e-01 | 93.1% | 85.3% |
| 5052150 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 46.0 | 5.14e-01 | 77.8% | 98.2% |
| 5026915 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 43.0 | 4.99e-01 | 77.8% | 100.0% |
| 4014411 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.64 | 46.0 | 4.20e-01 | 75.0% | 63.2% |
| 5074983 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.64 | 49.0 | 4.55e-01 | 94.4% | 65.6% |
| 4971396 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 44.0 | 4.90e-01 | 79.2% | 96.4% |
| 3922241 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.63 | 42.0 | 3.94e-01 | 86.1% | 55.6% |
| 2577567 | 1.1.2.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox | 0.62 | 43.0 | 4.05e-01 | 76.4% | 57.6% |
| 2559791 | 4187.2.1.1 ↗ | a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA | 0.62 | 44.0 | 3.98e-01 | 77.8% | 55.8% |
| 3184022 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.61 | 47.0 | 3.94e-01 | 84.7% | 64.6% |
| 3972526 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 42.0 | 4.33e-01 | 72.2% | 95.7% |
| 3593981 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.61 | 45.0 | 4.03e-01 | 79.2% | 60.0% |
| 4648475 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.61 | 47.0 | 5.06e-01 | 80.6% | 100.0% |
| 3640623 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.61 | 53.0 | 4.71e-01 | 100.0% | 66.7% |
| 4956437 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.61 | 50.0 | 4.02e-01 | 88.9% | 60.7% |
| 3601859 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 44.0 | 4.66e-01 | 77.8% | 100.0% |
| 3517068 | 3115.1.1.6 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 | 0.61 | 48.0 | 5.06e-01 | 88.9% | 100.0% |
| 4992171 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 38.0 | 3.95e-01 | 77.8% | 70.8% |
| 5053865 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.59 | 51.0 | 4.79e-01 | 100.0% | 81.1% |
| 3244077 | 375.1.1.58 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MCM_OB | 0.59 | 43.0 | 4.58e-01 | 79.2% | 93.3% |
| 2640865 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 42.0 | 4.57e-01 | 77.8% | 100.0% |
| 5032056 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.58 | 41.0 | 3.64e-01 | 73.6% | 86.4% |
| 3478866 | 4135.1.1.0 ↗ | beta duplicates or obligate multimers › MAL13P1.257-like › MAL13P1.257-like › MAL13P1.257-like | 0.58 | 45.0 | 3.57e-01 | 86.1% | 68.8% |
| 3187671 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 42.0 | 4.50e-01 | 79.2% | 93.3% |
| 3719741 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 41.0 | 4.55e-01 | 76.4% | 98.2% |
| 3999432 | 11.2.1.52 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_nem | 0.58 | 42.0 | 3.14e-01 | 76.4% | 39.4% |
| 4332271 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.58 | 43.0 | 3.59e-01 | 79.2% | 56.9% |
| 3892842 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.58 | 44.0 | 4.63e-01 | 81.9% | 90.8% |
| 3508717 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 40.0 | 4.07e-01 | 86.1% | 75.7% |
| 3210904 | 12.6.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related | 0.57 | 50.0 | 4.06e-01 | 97.2% | 97.8% |
| 5081134 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.57 | 38.0 | 4.04e-01 | 75.0% | 83.3% |
| 3897681 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 42.0 | 4.52e-01 | 80.6% | 95.0% |
| 3262497 | 11.1.1.801 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7035 | 0.56 | 43.0 | 3.58e-01 | 84.7% | 49.6% |
| 3314684 | 10.10.1.5 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › DUF7755 | 0.56 | 40.0 | 3.16e-01 | 76.4% | 68.4% |
| 3395520 | 387.1.1.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related | 0.56 | 40.0 | 4.32e-01 | 79.2% | 90.0% |
| 3987406 | 3115.6.1.1 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › RpoY | 0.55 | 48.0 | 4.77e-01 | 95.8% | 98.7% |
| 362818 | 221.1.1.17 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Stap_Strp_tox_C | 0.55 | 39.0 | 3.36e-01 | 76.4% | 79.2% |
| 3716614 | 11.1.1.67 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF525 | 0.55 | 41.0 | 3.46e-01 | 80.6% | 47.2% |
| 5033505 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 40.0 | 3.51e-01 | 77.8% | 66.4% |
| 1156534 | 10.5.1.4 ↗ | beta sandwiches › jelly-roll › Viral protein domain › Viral protein domain › Hema_HEFG | 0.54 | 39.0 | 3.07e-01 | 76.4% | 77.3% |
| 3874464 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.54 | 46.0 | 3.03e-01 | 100.0% | 28.7% |
| 4994977 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.54 | 45.0 | 3.73e-01 | 94.4% | 61.2% |
| 3574971 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.53 | 35.0 | 4.11e-01 | 87.5% | 98.0% |
| 5042823 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 41.0 | 3.64e-01 | 84.7% | 57.1% |
| 3236126 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.53 | 40.0 | 3.36e-01 | 80.6% | 46.4% |
| 3934311 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 35.0 | 3.53e-01 | 76.4% | 68.6% |
| 3785778 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.53 | 44.0 | 2.85e-01 | 90.3% | 37.5% |
| 1323187 | 219.1.1.38 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C93 | 0.52 | 42.0 | 3.21e-01 | 94.4% | 36.5% |
| 3621133 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 37.0 | 2.49e-01 | 76.4% | 96.6% |
| 3543316 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.51 | 43.0 | 2.74e-01 | 100.0% | 33.7% |
| 3414928 | 382.1.1.6 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › QVR | 0.51 | 38.0 | 3.60e-01 | 94.4% | 65.9% |
| 3435895 | 10.5.1.0 ↗ | beta sandwiches › jelly-roll › Viral protein domain › Viral protein domain | 0.51 | 39.0 | 2.90e-01 | 81.9% | 43.4% |
| 4029686 | 3662.1.1.0 ↗ | a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related | 0.50 | 36.0 | 3.14e-01 | 77.8% | 100.0% |
| 3816922 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.50 | 40.0 | 2.78e-01 | 91.7% | 81.8% |
| 4344924 | 868.1.1.3 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 | 0.50 | 43.0 | 3.19e-01 | 100.0% | 83.3% |
D4
high
residues 567-648
D5
medium
residues 208-305
Domain cluster:
rep: gwa1_scaffold_1_prodigal-single.1__X__X__00237__D109-187