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SRR1747045_scaffold_1_prodigal-single.1__X__X__00062
Bact-VirSRR1747045_scaffold_1_prodigal-single.1__X__X__00062
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 29-86
Domain cluster:
rep: NC_004735.1__NP_835708.1__Rm378p121__00121__D13-67
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1n95A00 | 1.25.40.120 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Protein prenylyltransferase | 0.75 | 67.0 | 4.16e-01 | 98.3% | 27.6% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.74 | 56.0 | 4.43e-01 | 81.0% | 95.7% |
| 2pziB03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.74 | 64.0 | 4.66e-01 | 94.8% | 94.7% |
| 6xssA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.72 | 57.0 | 5.36e-01 | 93.1% | 71.0% |
| 5nnpE01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.70 | 63.0 | 3.69e-01 | 100.0% | 19.5% |
| 5an3A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.70 | 56.0 | 4.30e-01 | 96.6% | 39.5% |
| 2cfuA02 | 1.25.40.880 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Alkyl sulfatase, dimerisation domain | 0.69 | 57.0 | 4.27e-01 | 100.0% | 37.6% |
| 6hftA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.67 | 60.0 | 4.66e-01 | 100.0% | 66.9% |
| 5g05P02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.67 | 60.0 | 4.04e-01 | 98.3% | 40.8% |
| 2pl2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 59.0 | 4.06e-01 | 100.0% | 43.3% |
| 4ui9J00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 60.0 | 3.45e-01 | 100.0% | 16.7% |
| 7tj4A01 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.66 | 58.0 | 4.57e-01 | 98.3% | 66.7% |
| 3umvA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.65 | 57.0 | 4.11e-01 | 100.0% | 42.1% |
| 2lniA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.65 | 57.0 | 4.42e-01 | 100.0% | 63.2% |
| 1np7A02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.65 | 56.0 | 4.50e-01 | 100.0% | 57.1% |
| 2fbnA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.65 | 58.0 | 4.25e-01 | 100.0% | 55.6% |
| 1tjcA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.65 | 58.0 | 4.93e-01 | 100.0% | 91.6% |
| 2q7fA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 58.0 | 3.95e-01 | 100.0% | 42.8% |
| 2ooeA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.63 | 56.0 | 3.86e-01 | 100.0% | 30.0% |
| 2vgxB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.63 | 56.0 | 4.19e-01 | 100.0% | 55.2% |
| 2vxgA02 | 1.10.220.100 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › conserved c-terminal region of ge- 1 | 0.62 | 53.0 | 4.70e-01 | 96.6% | 77.6% |
| 3ph0C00 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.62 | 49.0 | 5.06e-01 | 96.6% | 98.1% |
| 7qihA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.62 | 55.0 | 4.58e-01 | 100.0% | 83.2% |
| 2if4A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.62 | 52.0 | 4.07e-01 | 98.3% | 74.4% |
| 5mj6A04 | 1.25.50.20 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › | 0.61 | 50.0 | 3.20e-01 | 100.0% | 28.4% |
| 3qwwA03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 47.0 | 3.45e-01 | 94.8% | 31.4% |
| 1kxpD01 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.57 | 45.0 | 3.97e-01 | 86.2% | 62.8% |
| 3fmcC01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.57 | 42.0 | 2.76e-01 | 84.5% | 22.8% |
| 3oxfA05 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 44.0 | 4.12e-01 | 98.3% | 80.0% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3451004 | 109.4.1.201 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_14,TPR_19 | 0.71 | 64.0 | 4.29e-01 | 98.3% | 39.5% |
| 4366619 | 109.4.1.201 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_14,TPR_19 | 0.71 | 57.0 | 4.72e-01 | 94.8% | 50.0% |
| 3364221 | 109.7.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E › E_motif | 0.71 | 60.0 | 5.17e-01 | 100.0% | 60.0% |
| 4863935 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 54.0 | 5.42e-01 | 93.1% | 81.7% |
| 4984330 | 3651.1.1.0 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain | 0.69 | 60.0 | 5.27e-01 | 100.0% | 71.1% |
| 3905557 | 109.7.1.13 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E › PF31234 | 0.68 | 58.0 | 5.35e-01 | 100.0% | 73.3% |
| 4369831 | 109.4.1.3076 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, EST1_DNA_bind, TPR_8, TPR_10, TPR_12, TPR_17, TPR_16 | 0.68 | 62.0 | 3.61e-01 | 100.0% | 17.9% |
| 5048292 | 109.4.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 | 0.68 | 58.0 | 4.04e-01 | 93.1% | 44.4% |
| 5070631 | 109.4.1.202 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 | 0.68 | 62.0 | 4.89e-01 | 98.3% | 71.8% |
| 3341547 | 109.4.1.1263 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_16 | 0.68 | 60.0 | 3.73e-01 | 98.3% | 26.3% |
| 3657412 | 109.4.1.1347 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16, TPR_19 | 0.67 | 61.0 | 4.27e-01 | 100.0% | 46.3% |
| 3443361 | 109.4.1.202 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 | 0.67 | 61.0 | 4.27e-01 | 100.0% | 48.6% |
| 3645393 | 109.4.1.1478 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_11, TPR_16 | 0.67 | 61.0 | 3.89e-01 | 100.0% | 32.3% |
| 3835282 | 109.4.1.1441 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_11, TPR_16 | 0.67 | 59.0 | 4.00e-01 | 100.0% | 39.1% |
| 3340836 | 109.4.1.1491 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_8, TPR_11, TPR_16 | 0.67 | 59.0 | 4.04e-01 | 100.0% | 41.0% |
| 3385208 | 109.4.1.2589 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, EST1_DNA_bind, TPR_8, TPR_11, TPR_16 | 0.66 | 59.0 | 3.64e-01 | 100.0% | 25.5% |
| 4945358 | 109.4.1.202 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 | 0.66 | 60.0 | 3.75e-01 | 100.0% | 27.8% |
| 5025673 | 109.4.1.210 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 | 0.66 | 58.0 | 4.02e-01 | 98.3% | 30.3% |
| 3448598 | 3932.1.1.0 ↗ | alpha bundles › CRISPR/Cas system-associated protein Csm6 6H domain › CRISPR/Cas system-associated protein Csm6 6H domain › CRISPR/Cas system-associated protein Csm6 6H domain | 0.65 | 52.0 | 5.23e-01 | 94.8% | 86.7% |
| 5071272 | 109.4.1.202 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 | 0.65 | 58.0 | 3.94e-01 | 100.0% | 54.8% |
| 3761203 | 529.1.1.0 ↗ | few secondary structure elements › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) | 0.65 | 50.0 | 4.23e-01 | 91.4% | 48.6% |
| 59844 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 59.0 | 4.96e-01 | 100.0% | 91.6% |
| 4974718 | 109.4.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 | 0.63 | 56.0 | 4.46e-01 | 100.0% | 72.2% |