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SRR1747045_scaffold_1_prodigal-single.1__X__X__00160
Bact-VirSRR1747045_scaffold_1_prodigal-single.1__X__X__00160
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-185
Domain cluster:
rep: FR823450.1__CBZ42285.1__X__00118__D54-171
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fprB00 | 3.30.70.2910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 36.0 | 3.98e-01 | 84.0% | 65.6% |
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.65 | 32.0 | 3.83e-01 | 83.4% | 68.5% |
| 3i4hX01 | 3.30.70.1890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 39.0 | 4.30e-01 | 87.1% | 75.8% |
| 2e7vA01 | 3.30.70.960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SEA domain | 0.60 | 34.0 | 4.23e-01 | 87.1% | 86.7% |
| 1v8cA02 | 3.30.1370.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain | 0.60 | 28.0 | 3.88e-01 | 82.2% | 90.0% |
| 3ramA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 30.0 | 3.46e-01 | 92.6% | 69.5% |
| 4c97A02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 34.0 | 3.71e-01 | 84.0% | 74.6% |
| 4i6yA02 | 3.30.70.420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain | 0.52 | 28.0 | 3.26e-01 | 83.4% | 71.8% |
| 2xzmJ00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.52 | 28.0 | 3.46e-01 | 70.6% | 81.0% |
| 2vouA02 | 3.30.9.60 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › | 0.50 | 28.0 | 2.93e-01 | 85.9% | 59.9% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4619723 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.64 | 34.0 | 3.95e-01 | 73.0% | 69.2% |
| 3280414 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.64 | 34.0 | 4.14e-01 | 84.7% | 79.0% |
| 3613691 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 34.0 | 3.91e-01 | 84.0% | 69.2% |
| 3729211 | 304.4.1.49 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AtuA | 0.60 | 32.0 | 3.71e-01 | 83.4% | 70.4% |
| 4927440 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.60 | 32.0 | 4.04e-01 | 70.6% | 85.0% |
| 3971017 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.59 | 31.0 | 3.73e-01 | 70.6% | 73.6% |
| 5044328 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.59 | 39.0 | 3.47e-01 | 75.5% | 47.4% |
| 3177336 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.58 | 30.0 | 3.58e-01 | 74.2% | 72.4% |
| 3438216 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.58 | 39.0 | 4.53e-01 | 86.5% | 93.3% |
| 3612888 | 304.31.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase | 0.58 | 32.0 | 3.62e-01 | 85.3% | 70.0% |
| 4948199 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.57 | 33.0 | 4.25e-01 | 74.2% | 98.9% |
| 4105404 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.57 | 30.0 | 3.46e-01 | 75.5% | 68.7% |
| 3576789 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.56 | 31.0 | 2.99e-01 | 71.2% | 45.9% |
| 4979177 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.56 | 34.0 | 4.27e-01 | 76.1% | 100.0% |
| 5026790 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.55 | 31.0 | 3.94e-01 | 73.0% | 91.0% |
| 3596783 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.55 | 36.0 | 4.15e-01 | 84.7% | 91.3% |
| 4836316 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.55 | 32.0 | 2.94e-01 | 75.5% | 42.7% |
| 4934212 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.55 | 31.0 | 4.06e-01 | 73.0% | 96.8% |
| 4991896 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.55 | 31.0 | 4.01e-01 | 71.8% | 100.0% |
| 3654856 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.54 | 34.0 | 4.23e-01 | 73.6% | 100.0% |
| 5045876 | 304.51.1.7 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 | 0.53 | 35.0 | 3.74e-01 | 84.7% | 74.5% |
| 3497366 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.52 | 31.0 | 2.76e-01 | 71.2% | 40.9% |
| 4309280 | 304.51.1.7 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 | 0.51 | 33.0 | 3.65e-01 | 85.3% | 79.3% |
| 4996331 | 304.51.1.7 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 | 0.50 | 34.0 | 3.62e-01 | 85.9% | 76.6% |