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SRR1747045_scaffold_1_prodigal-single.1__X__X__00167
Bact-VirSRR1747045_scaffold_1_prodigal-single.1__X__X__00167
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 66-123
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6j7cA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.57 | 40.0 | 3.02e-01 | 75.9% | 76.5% |
| 1tm0A01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.54 | 44.0 | 3.23e-01 | 93.1% | 78.7% |
| 3tg9A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.52 | 43.0 | 2.78e-01 | 100.0% | 81.1% |
| 4rbnA01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 42.0 | 3.37e-01 | 100.0% | 56.6% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3854758 | 4357.1.1.5 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE_4 | 0.72 | 49.0 | 4.77e-01 | 93.1% | 64.6% |
| 5021847 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.65 | 58.0 | 3.81e-01 | 100.0% | 34.7% |
| 4471230 | 223.10.1.1 ↗ | a+b three layers › Profilin-like › Stage II sporulation protein SA › Stage II sporulation protein SA › SpoIISA_toxin | 0.63 | 43.0 | 3.21e-01 | 72.4% | 32.3% |
| 3385150 | 7516.1.1.51 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_21 | 0.62 | 46.0 | 2.73e-01 | 79.3% | 68.9% |
| 3798336 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.61 | 45.0 | 4.34e-01 | 94.8% | 68.6% |
| 5049481 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 51.0 | 3.99e-01 | 93.1% | 55.3% |
| 3436834 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.57 | 45.0 | 2.95e-01 | 91.4% | 37.2% |
| 4575824 | 2.8.1.2 ↗ | beta barrels › OB-fold › mu transposases-C › mu transposases-C › Mu-transpos_C_2 | 0.51 | 34.0 | 3.26e-01 | 70.7% | 95.7% |
| 3701712 | 2485.1.1.1 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin | 0.50 | 35.0 | 2.86e-01 | 77.6% | 84.6% |
| 4480144 | 129.1.1.2 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 3HCDH | 0.50 | 40.0 | 3.23e-01 | 96.6% | 70.4% |