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SRR1747045_scaffold_1_prodigal-single.1__X__X__00177
Bact-VirSRR1747045_scaffold_1_prodigal-single.1__X__X__00177
Identity
- Kingdom:
- phage
Quality
59.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 18-68
D2
medium
residues 246-390
D3
medium
residues 515-556
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4pkcC00 | 6.20.90.20 | Special › Other non-globular › SH3 type barrels. › Benzylsuccinate synthase gamma subunit | 0.56 | 38.0 | 3.90e-01 | 73.8% | 92.7% |
| 2d29A02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.55 | 41.0 | 3.32e-01 | 97.6% | 64.9% |
| 1y12B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.55 | 41.0 | 2.99e-01 | 95.2% | 75.0% |
| 2qecA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 39.0 | 2.71e-01 | 85.7% | 21.7% |
| 2liyA00 | 2.20.25.390 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Stomagen | 0.51 | 35.0 | 3.49e-01 | 76.2% | 95.6% |
| 4aieA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 34.0 | 3.02e-01 | 76.2% | 40.3% |
| 1m53A03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 34.0 | 2.94e-01 | 78.6% | 39.0% |
| 7xpkA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.50 | 37.0 | 2.71e-01 | 88.1% | 77.2% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3400863 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.59 | 45.0 | 3.48e-01 | 95.2% | 96.7% |
| 4961820 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.57 | 38.0 | 3.52e-01 | 92.9% | 48.3% |
| 3958138 | 4052.1.1.0 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like | 0.54 | 41.0 | 3.05e-01 | 92.9% | 88.9% |
| 3614438 | 4052.1.1.0 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like | 0.52 | 39.0 | 2.97e-01 | 90.5% | 60.8% |
| 5048975 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.51 | 38.0 | 3.13e-01 | 95.2% | 45.0% |
| 5031312 | 205.1.1.16 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 | 0.51 | 38.0 | 3.12e-01 | 95.2% | 39.0% |
| 3505198 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.50 | 38.0 | 2.68e-01 | 100.0% | 33.8% |