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SRR1747045_scaffold_1_prodigal-single.1__X__X__00178
Bact-VirSRR1747045_scaffold_1_prodigal-single.1__X__X__00178
Identity
- Kingdom:
- phage
Quality
70.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-75
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4e4tA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.56 | 44.0 | 3.15e-01 | 88.9% | 30.2% |
| 3uwpA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 45.0 | 3.23e-01 | 95.2% | 30.5% |
| 3e10A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.54 | 41.0 | 3.15e-01 | 85.7% | 86.7% |
| 4pibA00 | 2.60.40.3910 | Mainly Beta › Sandwich › Immunoglobulin-like › Inclusion body protein | 0.53 | 40.0 | 3.03e-01 | 85.7% | 75.3% |
| 4ae2B02 | 2.60.120.1000 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 41.0 | 3.14e-01 | 93.7% | 45.0% |
| 3gb0A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 39.0 | 3.32e-01 | 87.3% | 67.9% |
| 4gafB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 3.34e-01 | 85.7% | 54.5% |
| 1f46B00 | 3.30.1400.10 | Alpha Beta › 2-Layer Sandwich › Cell Division Protein Zipa; Chain: A, › ZipA, C-terminal FtsZ-binding domain | 0.50 | 41.0 | 3.37e-01 | 100.0% | 95.0% |
| 4ruwA01 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.50 | 40.0 | 2.75e-01 | 96.8% | 47.2% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3692725 | 2003.1.5.65 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DOT1 | 0.63 | 48.0 | 2.98e-01 | 85.7% | 45.5% |
| 3557173 | 2003.1.5.65 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DOT1 | 0.60 | 48.0 | 3.03e-01 | 93.7% | 17.2% |
| 3994498 | 2003.1.5.65 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DOT1 | 0.58 | 47.0 | 2.96e-01 | 93.7% | 18.1% |
| 4651251 | 2003.1.5.65 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DOT1 | 0.56 | 44.0 | 2.76e-01 | 93.7% | 15.6% |
| 3510141 | 2003.1.5.65 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DOT1 | 0.54 | 42.0 | 3.03e-01 | 93.7% | 27.1% |
| 5021739 | 11.1.1.33 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin | 0.53 | 43.0 | 3.33e-01 | 100.0% | 53.5% |
| 4003302 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.52 | 41.0 | 3.39e-01 | 92.1% | 50.8% |
| 3262140 | 304.9.1.93 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1, PF27577 | 0.52 | 40.0 | 3.21e-01 | 92.1% | 40.7% |
| 4977974 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.51 | 39.0 | 3.15e-01 | 85.7% | 71.5% |
| 3255511 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.50 | 40.0 | 2.98e-01 | 93.7% | 49.5% |