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SRR1747045_scaffold_1_prodigal-single.1__X__X__00179

Bact-Vir

SRR1747045_scaffold_1_prodigal-single.1__X__X__00179

Identity

Kingdom:
phage

Quality

80.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 38-164
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00239.27 best Resolvase 86.8 2.20e-24 100.0% 88.4%
CATH (88)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6dgbA01 3.40.50.1390 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Resolvase, N-terminal catalytic domain 0.87 63.0 7.28e-01 77.2% 100.0%
1zr4A01 3.40.50.1390 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Resolvase, N-terminal catalytic domain 0.86 63.0 7.19e-01 80.3% 98.0%
3bvpB00 3.40.50.1390 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Resolvase, N-terminal catalytic domain 0.81 77.0 7.69e-01 100.0% 98.5%
3guvA00 3.40.50.1390 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Resolvase, N-terminal catalytic domain 0.79 75.0 7.01e-01 99.2% 89.3%
4bqqA01 3.40.50.1390 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Resolvase, N-terminal catalytic domain 0.75 66.0 6.36e-01 91.3% 86.4%
2r0qC01 3.40.50.1390 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Resolvase, N-terminal catalytic domain 0.75 66.0 6.43e-01 99.2% 84.8%
3g13B00 3.40.50.1390 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Resolvase, N-terminal catalytic domain 0.73 66.0 6.44e-01 99.2% 94.9%
8a57D01 3.40.50.11060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTPase HflX, N-terminal domain 0.72 54.0 5.92e-01 80.3% 97.1%
3umoA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.68 57.0 4.25e-01 89.0% 69.6%
3ie7A00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.68 55.0 4.15e-01 86.6% 68.9%
4ycsA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 49.0 4.98e-01 89.8% 78.0%
2w42B01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 53.0 4.89e-01 84.3% 73.4%
2f02B00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.66 53.0 4.01e-01 86.6% 69.1%
2i0fA00 3.40.50.960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase 0.65 53.0 5.07e-01 86.6% 95.9%
3ksmA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 53.0 5.40e-01 88.2% 98.4%
2abqA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.65 54.0 4.07e-01 89.0% 69.2%
3gbvA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 53.0 5.11e-01 85.8% 93.6%
3kjxA03 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 51.0 4.93e-01 83.5% 86.5%
4wutA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 52.0 5.09e-01 85.8% 94.2%
1gudA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 54.0 5.28e-01 91.3% 95.7%
4rxtA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 52.0 5.08e-01 85.8% 92.0%
1c41A00 3.40.50.960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase 0.64 52.0 4.77e-01 86.6% 89.1%
3rotA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 51.0 5.04e-01 85.0% 94.1%
4rk0D01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 51.0 5.07e-01 85.8% 92.6%
3l6uA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 52.0 5.22e-01 88.2% 95.2%
1tjyA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 52.0 4.82e-01 89.8% 94.5%
3jzjA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.63 47.0 4.11e-01 78.7% 74.0%
4rk6A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 51.0 5.17e-01 85.8% 93.7%
2h3hA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 53.0 5.02e-01 90.6% 93.2%
3n0xA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 51.0 4.74e-01 88.2% 72.0%
1k7cA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.62 54.0 4.35e-01 92.1% 69.5%
1abeA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 51.0 5.02e-01 88.2% 94.2%
3qkwB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.62 50.0 4.56e-01 86.6% 82.8%
6ecpB01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.62 46.0 4.46e-01 89.8% 68.3%
1ba2A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 50.0 5.05e-01 85.8% 96.0%
7kx9A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 50.0 4.80e-01 85.8% 81.9%
4pevA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 51.0 5.07e-01 88.2% 95.4%
2xvyA01 3.40.50.1400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 49.0 4.84e-01 86.6% 97.8%
4kq9A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 48.0 4.15e-01 89.0% 53.0%
4rkrB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 50.0 5.05e-01 89.0% 91.5%
1tjyA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 48.0 4.52e-01 92.1% 69.3%
3kjxA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 50.0 4.98e-01 88.2% 94.7%
3gbvA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 48.0 4.63e-01 89.8% 72.5%
2zskA01 3.40.50.1860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 47.0 4.92e-01 82.7% 94.8%
4wzzA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 49.0 4.58e-01 89.8% 69.8%
4y9tA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 47.0 4.28e-01 89.0% 60.2%
2f4nA01 3.40.50.10790 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal 0.60 53.0 5.12e-01 97.6% 96.6%
4maaA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 51.0 4.61e-01 90.6% 72.4%
4p1zA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 48.0 4.89e-01 86.6% 93.7%
3n75A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 43.0 4.36e-01 92.1% 73.6%
2uvgA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.60 45.0 4.06e-01 78.7% 76.3%
4evqA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 50.0 4.69e-01 90.6% 74.1%
7kdyB01 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.60 49.0 4.68e-01 89.0% 96.1%
5ul3A01 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.60 51.0 4.78e-01 93.7% 98.7%
3lftA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.60 48.0 4.64e-01 88.2% 93.3%
5bq3A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 48.0 4.52e-01 91.3% 71.6%
4yo7A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 48.0 4.78e-01 85.8% 93.8%
4c76A00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.59 46.0 4.13e-01 83.5% 93.4%
5c5cA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 50.0 4.61e-01 91.3% 76.2%
4gi5A00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.59 51.0 4.13e-01 96.9% 96.9%
3d02A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 46.0 4.42e-01 92.1% 70.6%
3c3kA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 47.0 4.62e-01 85.8% 87.0%
2fb6A00 3.40.1260.10 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like 0.59 39.0 4.06e-01 89.0% 72.4%
3ojcA01 3.40.50.1860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 46.0 4.82e-01 83.5% 94.9%
4rw0A00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.59 49.0 4.33e-01 89.8% 73.9%
1uxoA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 48.0 4.25e-01 89.0% 80.6%
3g85A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 48.0 4.64e-01 89.0% 89.5%
3jzmA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 47.0 3.78e-01 85.8% 60.9%
1akqA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.58 45.0 4.34e-01 83.5% 97.3%
2h0aA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 45.0 4.76e-01 88.2% 93.8%
5b3kA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.58 45.0 4.28e-01 83.5% 96.7%
4nqrA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 49.0 4.66e-01 94.5% 81.3%
2ffiA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.58 43.0 3.42e-01 79.5% 86.1%
4rxuA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 48.0 4.63e-01 91.3% 91.8%
4kmrA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 48.0 4.91e-01 91.3% 92.0%
2a4kB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 47.0 4.11e-01 91.3% 94.9%
3tnjA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 41.0 4.23e-01 78.0% 95.0%
4h2dA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.55 43.0 4.02e-01 82.7% 92.4%
1szpB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 45.0 3.80e-01 89.0% 55.9%
5e3iA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.54 40.0 4.40e-01 81.9% 98.0%
2ejwA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 45.0 4.07e-01 93.7% 90.7%
3graA00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.54 44.0 3.90e-01 88.2% 73.5%
4n9wA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.53 45.0 4.04e-01 93.7% 74.9%
3bmxA02 3.40.50.1700 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycoside hydrolase family 3 C-terminal domain 0.53 47.0 3.96e-01 100.0% 76.2%
4tkzA00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.53 42.0 4.18e-01 85.8% 86.9%
3er6A00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.52 43.0 3.77e-01 88.2% 72.9%
3gybA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 41.0 4.24e-01 85.0% 88.6%
1ns5B00 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.52 40.0 3.83e-01 82.7% 92.2%
ECOD (94)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3955949 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.89 66.0 6.13e-01 78.7% 62.6%
5009774 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.87 66.0 6.18e-01 78.0% 66.0%
5081151 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.86 75.0 7.11e-01 90.6% 80.7%
4087037 7565.1.1.0 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like 0.86 71.0 6.20e-01 93.7% 60.6%
4928582 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.86 81.0 7.93e-01 99.2% 96.3%
4009628 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.85 73.0 6.90e-01 90.6% 77.2%
5011494 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.84 78.0 6.33e-01 96.1% 60.5%
3962017 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.84 72.0 6.98e-01 89.8% 90.0%
5018476 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.84 70.0 6.88e-01 89.8% 82.2%
3978988 7565.1.1.0 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like 0.83 70.0 6.07e-01 93.7% 61.1%
3590725 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.82 69.0 6.58e-01 93.7% 76.6%
3978142 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.82 74.0 7.11e-01 99.2% 85.0%
4010034 7565.1.1.0 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like 0.82 70.0 6.53e-01 92.1% 74.2%
5060780 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.81 77.0 7.25e-01 100.0% 88.7%
4988741 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.81 76.0 7.27e-01 100.0% 92.4%
4599777 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.81 68.0 6.62e-01 91.3% 81.5%
3282922 7565.1.1.0 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like 0.81 61.0 6.79e-01 85.8% 98.0%
4041827 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.81 73.0 6.85e-01 99.2% 80.7%
3589522 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.80 67.0 6.37e-01 91.3% 75.9%
5079267 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.80 67.0 6.67e-01 86.6% 98.5%
4355990 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.80 70.0 6.50e-01 92.1% 80.0%
4990646 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.80 73.0 6.97e-01 96.1% 86.2%
4486944 7565.1.1.0 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like 0.80 72.0 6.32e-01 99.2% 67.2%
3590285 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.80 72.0 6.99e-01 96.9% 86.4%
134345 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.79 75.0 7.01e-01 99.2% 89.3%
4969519 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.79 73.0 7.44e-01 100.0% 100.0%
4647340 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.79 71.0 6.95e-01 99.2% 89.6%
3590745 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.79 71.0 6.85e-01 99.2% 85.7%
5038786 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.78 60.0 6.47e-01 79.5% 97.3%
4376270 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.78 73.0 6.02e-01 98.4% 59.5%
4932315 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.77 72.0 6.81e-01 99.2% 88.7%
4998604 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.77 67.0 6.45e-01 90.6% 82.9%
170205 7565.1.1.1 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase 0.72 66.0 6.25e-01 100.0% 84.8%
3260120 7590.1.1.2 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi 0.70 55.0 5.46e-01 83.5% 87.4%
None 0.70 57.0 4.23e-01 86.6% 69.9%
3796939 2006.1.6.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.69 54.0 4.44e-01 82.7% 78.3%
369252 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.68 55.0 4.15e-01 86.6% 68.9%
3941622 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.68 55.0 4.16e-01 86.6% 69.7%
3947631 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.68 56.0 4.22e-01 89.0% 70.5%
3405128 7590.1.1.2 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi 0.66 52.0 4.79e-01 83.5% 74.5%
4975716 7566.1.1.2 a/b three-layered sandwiches › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › GTP-bdg_N 0.66 59.0 5.24e-01 98.4% 74.6%
4956039 2007.1.13.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › DMRL_synthase 0.66 54.0 5.24e-01 86.6% 96.4%
3589691 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.66 53.0 4.06e-01 86.6% 70.0%
3936292 7590.1.1.2 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi 0.65 51.0 4.69e-01 83.5% 77.6%
9527 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.65 54.0 4.07e-01 89.0% 68.6%
2817077 7590.1.1.2 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi 0.65 51.0 4.65e-01 83.5% 71.3%
4963818 7541.1.1.1 a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › MoCF_biosynth 0.64 53.0 4.98e-01 89.0% 96.8%
3415138 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.64 52.0 4.34e-01 87.4% 85.3%
3589207 2007.2.2.2 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › PTS_IIB 0.64 46.0 5.25e-01 82.7% 100.0%
4023510 7575.1.1.0 a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like 0.63 53.0 4.33e-01 89.8% 90.2%
3932575 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.63 52.0 4.31e-01 89.0% 84.8%
3970692 7541.1.1.0 a/b three-layered sandwiches › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins › Molybdenum cofactor biosynthesis proteins 0.63 52.0 4.76e-01 89.0% 91.8%
3405122 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.63 52.0 4.22e-01 87.4% 85.1%
3586885 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.63 51.0 4.66e-01 85.8% 77.0%
3940320 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.63 51.0 4.19e-01 86.6% 84.8%
3586624 7590.1.1.6 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › ArgoMid 0.63 50.0 4.56e-01 84.3% 72.7%
3938581 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.63 50.0 4.52e-01 85.8% 79.4%
4575491 2007.1.2.11 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 0.62 49.0 4.51e-01 89.0% 64.2%
1874430 7512.1.1.78 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Gtf3_N 0.62 50.0 4.68e-01 86.6% 89.4%
3616325 7590.1.1.0 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs 0.62 49.0 4.55e-01 83.5% 75.0%
4299794 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.62 51.0 4.20e-01 87.4% 85.8%
3802041 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.62 52.0 4.39e-01 89.8% 86.7%
3987593 2007.1.2.10 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 0.62 46.0 4.74e-01 91.3% 83.3%
4963720 2007.2.2.2 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › PTS_IIB 0.61 44.0 4.95e-01 82.7% 96.9%
4113044 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.61 51.0 4.09e-01 89.8% 86.0%
1322981 2007.1.2.13 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 0.61 47.0 4.67e-01 92.9% 78.0%
4065153 2007.1.6.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › THF_DHG_CYH 0.61 45.0 4.52e-01 89.0% 75.4%
3245843 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.61 50.0 4.20e-01 89.0% 83.6%
4522775 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.61 50.0 4.06e-01 88.2% 81.7%
4958379 2007.2.1.3 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › FMN_red 0.60 46.0 4.38e-01 81.9% 98.1%
3282261 7523.1.1.8 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1 0.60 45.0 4.00e-01 78.7% 74.1%
3943294 2007.2.2.2 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › PTS_IIB 0.60 42.0 4.76e-01 83.5% 98.9%
4981268 2484.1.1.59 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA 0.59 47.0 3.67e-01 83.5% 70.0%
3898913 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.59 49.0 4.31e-01 91.3% 72.1%
4964839 7512.1.1.30 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.59 48.0 4.58e-01 88.2% 92.7%
990778 2007.2.1.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_1 0.58 45.0 4.38e-01 83.5% 97.9%
3991797 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.58 49.0 4.12e-01 91.3% 63.3%
1518764 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.58 37.0 4.12e-01 91.3% 85.1%
4928551 2007.1.14.6 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › CbiX 0.58 46.0 4.83e-01 86.6% 99.1%
4999481 2002.1.1.8 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Cellulase 0.57 41.0 3.18e-01 74.8% 93.1%
5047276 7523.1.1.8 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1 0.56 42.0 3.72e-01 78.7% 71.6%
3587675 2007.2.2.2 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › PTS_IIB 0.56 40.0 4.56e-01 82.7% 100.0%
4945393 7523.1.1.28 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_8 0.56 42.0 3.02e-01 78.7% 71.3%
5081570 2007.1.1.24 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › DUF4350 0.54 45.0 3.59e-01 89.8% 85.4%
4669495 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.54 40.0 4.35e-01 79.5% 98.0%
3606804 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 46.0 4.22e-01 96.1% 94.3%
3947905 2010.1.1.3 a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man 0.53 42.0 4.24e-01 85.8% 88.0%
3960401 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.53 38.0 4.21e-01 78.7% 98.9%
3613736 7516.1.1.60 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_25 0.53 46.0 3.67e-01 96.1% 76.9%
4970261 300.1.1.0 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.53 37.0 3.35e-01 73.2% 80.0%
4518009 2488.1.1.5 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase 0.52 39.0 3.75e-01 79.5% 91.3%
3999687 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.52 42.0 3.68e-01 89.0% 66.0%
5001244 2007.2.1.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_1 0.52 41.0 3.96e-01 92.9% 75.2%
4274433 2484.1.1.55 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom 0.51 41.0 3.61e-01 89.0% 69.0%
D2 high residues 198-261
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13384.13 best HTH_23 26.6 5.40e-06 62.5% 60.0%
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.77 54.0 4.29e-01 100.0% 37.3%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 52.0 5.26e-01 70.3% 95.2%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 48.0 4.76e-01 96.9% 63.6%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 52.0 5.56e-01 73.4% 89.1%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 50.0 5.34e-01 70.3% 85.2%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 49.0 4.92e-01 95.3% 68.8%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 57.0 5.45e-01 84.4% 76.0%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 6.08e-01 89.1% 93.1%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 51.0 5.64e-01 76.6% 94.0%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 51.0 5.50e-01 79.7% 87.0%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 50.0 5.25e-01 79.7% 83.9%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 49.0 4.97e-01 71.9% 93.7%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 48.0 4.46e-01 89.1% 56.2%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 51.0 5.02e-01 76.6% 91.3%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 5.90e-01 92.2% 86.6%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 5.21e-01 85.9% 71.2%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 4.33e-01 87.5% 52.5%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 5.07e-01 87.5% 67.8%
1wi9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 48.0 5.06e-01 71.9% 91.4%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 51.0 4.62e-01 78.1% 81.6%
1qbjC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 47.0 4.67e-01 70.3% 87.9%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 55.0 5.83e-01 89.1% 98.2%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 57.0 5.81e-01 92.2% 92.1%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 47.0 4.69e-01 70.3% 69.2%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.68 46.0 3.06e-01 73.4% 17.6%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 5.30e-01 90.6% 79.2%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 54.0 5.65e-01 92.2% 94.8%
5fo5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 57.0 5.15e-01 93.8% 78.4%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 54.0 5.33e-01 93.8% 84.3%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 46.0 3.91e-01 73.4% 97.1%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 57.0 5.26e-01 98.4% 86.6%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 54.0 4.89e-01 92.2% 76.4%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 53.0 5.01e-01 90.6% 75.0%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 57.0 5.10e-01 98.4% 78.9%
3edpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 48.0 4.54e-01 79.7% 86.8%
3fm5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 56.0 4.48e-01 98.4% 49.2%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 57.0 4.55e-01 100.0% 76.7%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 52.0 4.97e-01 89.1% 86.8%
3nrvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 53.0 4.27e-01 93.8% 50.4%
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 45.0 4.20e-01 78.1% 59.8%
3cdhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 52.0 4.11e-01 92.2% 48.5%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 53.0 4.85e-01 93.8% 81.2%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 54.0 4.20e-01 98.4% 50.7%
2yveB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.61 46.0 3.42e-01 82.8% 82.0%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 53.0 4.84e-01 98.4% 83.0%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 53.0 5.18e-01 98.4% 90.1%
1s6lA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 45.0 4.96e-01 89.1% 100.0%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 54.0 5.05e-01 100.0% 85.9%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 52.0 4.11e-01 98.4% 72.5%
3py8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.60 51.0 4.00e-01 98.4% 64.6%
1xwrC00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.59 40.0 3.79e-01 98.4% 59.2%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 50.0 4.42e-01 100.0% 73.5%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 50.0 4.70e-01 100.0% 86.3%
8h6qD01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.54 46.0 3.00e-01 100.0% 25.4%
2fjrA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.51 43.0 4.13e-01 93.8% 81.6%
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.50 41.0 3.69e-01 100.0% 65.1%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4665755 101.1.1.470 alpha arrays › HTH › HTH › Three-helical HTH › Phage_terminase 0.81 57.0 6.32e-01 75.0% 100.0%
5030780 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.80 52.0 5.86e-01 70.3% 86.0%
4008046 101.1.1.348 alpha arrays › HTH › HTH › Three-helical HTH › PF30461 0.80 53.0 5.88e-01 100.0% 88.0%
4993585 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 56.0 5.77e-01 78.1% 78.3%
5074938 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 54.0 5.80e-01 71.9% 81.8%
4987653 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.77 50.0 5.73e-01 85.9% 93.3%
235968 138.1.1.9 alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delta_C 0.77 54.0 4.30e-01 100.0% 37.6%
5023952 101.1.2.888 alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4_2 0.77 55.0 5.36e-01 75.0% 75.7%
5068679 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.76 53.0 5.73e-01 76.6% 85.5%
5046692 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 50.0 5.79e-01 71.9% 97.8%
5062184 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 50.0 5.22e-01 71.9% 75.0%
3977377 101.1.2.836 alpha arrays › HTH › HTH › winged helix domain › Terminase_5 0.74 57.0 4.85e-01 92.2% 50.5%
3603167 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.74 55.0 5.48e-01 79.7% 78.5%
5055912 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 53.0 5.16e-01 76.6% 82.9%
3953111 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.73 60.0 5.87e-01 90.6% 81.4%
4974224 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 53.0 5.45e-01 79.7% 83.3%
3946793 101.1.1.259 alpha arrays › HTH › HTH › Three-helical HTH › Terminase_5 0.73 58.0 4.80e-01 93.8% 48.7%
3603081 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.72 51.0 4.84e-01 73.4% 89.3%
4941943 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.72 52.0 5.42e-01 78.1% 81.7%
4980888 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 52.0 5.24e-01 76.6% 75.4%
5060354 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 58.0 5.86e-01 98.4% 86.2%
5010215 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.72 51.0 5.29e-01 78.1% 80.0%
4984064 101.1.1.61 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AsnC-type 0.71 48.0 5.20e-01 71.9% 81.8%
3509240 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.71 47.0 4.76e-01 100.0% 67.7%
4007717 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.71 59.0 5.43e-01 89.1% 73.8%
3971154 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.71 59.0 5.76e-01 93.8% 84.3%
4977346 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 49.0 5.36e-01 73.4% 96.0%
4321251 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.71 59.0 5.49e-01 92.2% 73.4%
4131887 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.70 58.0 5.36e-01 90.6% 72.2%
3544647 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.70 48.0 4.83e-01 100.0% 70.8%
3941764 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.70 58.0 5.82e-01 93.8% 89.2%
4606780 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.69 56.0 5.78e-01 90.6% 93.3%
3509159 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.69 47.0 4.81e-01 100.0% 75.0%
2759 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.69 57.0 5.74e-01 92.2% 89.2%
3947091 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.69 55.0 5.72e-01 89.1% 93.3%
3404418 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.68 48.0 4.68e-01 100.0% 67.1%
3943462 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 48.0 5.08e-01 73.4% 92.7%
4945932 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 59.0 5.14e-01 95.3% 72.6%
3971977 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.68 57.0 5.30e-01 92.2% 77.5%
3409145 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.68 46.0 5.12e-01 100.0% 90.0%
3509592 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.67 45.0 4.66e-01 100.0% 75.0%
4944726 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 50.0 5.17e-01 100.0% 86.7%
1177545 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.65 54.0 5.35e-01 93.8% 86.8%
5013051 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 55.0 4.39e-01 95.3% 67.7%
4031672 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.64 56.0 5.27e-01 98.4% 90.0%
4659976 101.1.1.25 alpha arrays › HTH › HTH › Three-helical HTH › DUF433 0.63 44.0 3.38e-01 93.8% 32.9%
4978135 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.62 53.0 4.09e-01 95.3% 59.3%
3589664 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.62 54.0 4.95e-01 98.4% 85.9%
4197050 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.60 48.0 4.06e-01 93.8% 53.3%
4002185 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.56 47.0 4.48e-01 96.9% 97.3%
3803398 103.1.1.22 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › ARI1_UBAl 0.55 32.0 3.36e-01 79.7% 61.7%
4970801 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.53 42.0 3.89e-01 89.1% 76.5%