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SRR1747045_scaffold_1_prodigal-single.1__X__X__00180
Bact-VirSRR1747045_scaffold_1_prodigal-single.1__X__X__00180
Identity
- Kingdom:
- phage
Quality
82.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 38-122
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dzlA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.70 | 42.0 | 4.75e-01 | 90.6% | 78.8% |
| 2di0A01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.68 | 38.0 | 4.80e-01 | 80.0% | 100.0% |
| 1nmrA01 | 1.10.1900.10 | Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › c-terminal domain of poly(a) binding protein | 0.64 | 45.0 | 4.77e-01 | 89.4% | 82.9% |
| 1zq1C03 | 1.10.150.380 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › GatB domain, N-terminal subdomain | 0.62 | 37.0 | 4.32e-01 | 83.5% | 87.7% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 40.0 | 4.07e-01 | 72.9% | 69.5% |
| 1zx3A01 | 1.10.287.1020 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › NE0241-like | 0.60 | 34.0 | 3.42e-01 | 72.9% | 54.1% |
| 2f8lA01 | 1.10.150.470 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.60 | 38.0 | 3.91e-01 | 71.8% | 66.7% |
| 1fkaG00 | 1.10.455.10 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 | 0.59 | 50.0 | 4.49e-01 | 98.8% | 71.1% |
| 8gy0A01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.59 | 41.0 | 2.89e-01 | 77.6% | 22.1% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 40.0 | 4.09e-01 | 83.5% | 75.3% |
| 1qusA01 | 1.10.8.350 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Bacterial muramidase | 0.58 | 48.0 | 4.44e-01 | 94.1% | 85.8% |
| 4om8A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.54 | 37.0 | 3.32e-01 | 71.8% | 54.8% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.54 | 38.0 | 3.86e-01 | 87.1% | 74.4% |
| 2ahoB02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.54 | 40.0 | 3.96e-01 | 84.7% | 73.6% |
| 3tmpA01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.52 | 41.0 | 3.40e-01 | 85.9% | 64.7% |
| 2o2kA02 | 1.10.288.10 | Mainly Alpha › Orthogonal Bundle › Cobalamin-dependent Methionine Synthase; domain 2 › Cobalamin-dependent Methionine Synthase, domain 2 | 0.51 | 40.0 | 3.96e-01 | 87.1% | 88.8% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3336061 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.74 | 54.0 | 5.89e-01 | 77.6% | 100.0% |
| 3188460 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.72 | 50.0 | 3.68e-01 | 70.6% | 85.5% |
| 3873737 | 103.1.1.143 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_ARIH2_N | 0.69 | 43.0 | 5.01e-01 | 88.2% | 90.0% |
| 3430767 | 103.1.1.22 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › ARI1_UBAl | 0.68 | 44.0 | 4.94e-01 | 89.4% | 86.2% |
| 3522732 | 103.1.1.143 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_ARIH2_N | 0.67 | 43.0 | 4.67e-01 | 89.4% | 78.6% |
| 3249342 | 103.1.1.22 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › ARI1_UBAl | 0.67 | 44.0 | 5.00e-01 | 90.6% | 93.3% |
| 3935291 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.66 | 42.0 | 4.87e-01 | 88.2% | 100.0% |
| 3680871 | 103.1.1.22 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › ARI1_UBAl | 0.65 | 44.0 | 4.57e-01 | 90.6% | 73.8% |
| 4378585 | 7014.1.1.2 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › TauE | 0.64 | 45.0 | 4.25e-01 | 100.0% | 60.0% |
| 3582407 | 103.1.1.22 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › ARI1_UBAl | 0.63 | 42.0 | 4.53e-01 | 89.4% | 82.9% |
| 3575611 | 103.1.1.84 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF28540 | 0.62 | 43.0 | 4.66e-01 | 98.8% | 88.6% |
| 4178644 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.61 | 43.0 | 4.25e-01 | 84.7% | 70.0% |
| 3435282 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.60 | 41.0 | 4.66e-01 | 88.2% | 100.0% |
| 4163021 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.59 | 41.0 | 3.88e-01 | 80.0% | 61.0% |
| 3345767 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.59 | 42.0 | 3.77e-01 | 82.4% | 52.0% |
| 4076590 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.59 | 44.0 | 4.36e-01 | 98.8% | 75.6% |
| 4987569 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.58 | 41.0 | 4.01e-01 | 85.9% | 66.3% |
| 4937470 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.57 | 44.0 | 4.03e-01 | 98.8% | 63.6% |
| 4945083 | 7014.1.1.0 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain | 0.55 | 44.0 | 4.02e-01 | 100.0% | 65.5% |
| 3606883 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.53 | 33.0 | 3.11e-01 | 74.1% | 49.1% |
| 3385552 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.52 | 41.0 | 4.07e-01 | 83.5% | 80.0% |
| 2723199 | 3455.1.1.0 ↗ | alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors | 0.50 | 42.0 | 3.75e-01 | 92.9% | 90.9% |