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SRR1747046_scaffold_29_prodigal-single.1__X__X__00027
Bact-VirSRR1747046_scaffold_29_prodigal-single.1__X__X__00027
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-74
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.58 | 27.0 | 3.18e-01 | 77.5% | 58.7% |
| 1vu2300 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 48.0 | 4.10e-01 | 100.0% | 78.7% |
| 4f0qD01 | 2.30.280.20 | Mainly Beta › Roll › PUA domain-like › | 0.56 | 45.0 | 3.17e-01 | 93.0% | 59.6% |
| 1av4A03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.52 | 45.0 | 2.82e-01 | 100.0% | 73.3% |
| 7s7rA01 | 2.60.40.2860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 38.0 | 3.23e-01 | 83.1% | 97.9% |
| 1hn0A03 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 43.0 | 2.89e-01 | 91.5% | 92.9% |
| 2vtwA00 | 2.60.90.30 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Fiber protein 1, C-terminal domain | 0.52 | 39.0 | 2.99e-01 | 87.3% | 42.4% |
| 6h9xA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 40.0 | 2.70e-01 | 88.7% | 50.0% |
| 3v9fA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 45.0 | 2.95e-01 | 98.6% | 98.0% |
| 4aghA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.51 | 34.0 | 3.34e-01 | 77.5% | 62.5% |
| 2q1fA03 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.50 | 42.0 | 2.89e-01 | 94.4% | 92.4% |
| 8hmcA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 33.0 | 2.20e-01 | 83.1% | 15.5% |
| 3ottA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 38.0 | 2.47e-01 | 80.3% | 99.3% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3917937 | 220.1.1.173 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_CERK | 0.63 | 53.0 | 4.63e-01 | 98.6% | 90.4% |
| 3489971 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 52.0 | 4.49e-01 | 100.0% | 91.7% |
| 3509362 | 220.1.1.160 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MADD | 0.61 | 54.0 | 4.93e-01 | 98.6% | 95.7% |
| 3701631 | 220.1.1.200 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_30 | 0.61 | 53.0 | 4.43e-01 | 98.6% | 82.4% |
| 4225402 | 206.1.1.12 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › SelO | 0.60 | 41.0 | 2.49e-01 | 70.4% | 31.3% |
| 3489363 | 206.1.1.12 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › SelO | 0.60 | 41.0 | 2.41e-01 | 70.4% | 28.5% |
| 3405822 | 220.1.1.43 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SIN1_PH | 0.59 | 52.0 | 4.15e-01 | 100.0% | 71.0% |
| 4024738 | 220.1.1.243 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF30062 | 0.59 | 51.0 | 4.50e-01 | 97.2% | 93.3% |
| 3223396 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 52.0 | 4.46e-01 | 100.0% | 88.7% |
| 3334910 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 49.0 | 4.16e-01 | 100.0% | 94.4% |
| 3741335 | 109.4.1.338 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIC1 | 0.55 | 36.0 | 2.46e-01 | 88.7% | 16.6% |
| 3788481 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 38.0 | 2.44e-01 | 78.9% | 30.6% |
| 3850937 | 4004.1.1.10 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › PI3K_1B_p101 | 0.53 | 46.0 | 3.47e-01 | 100.0% | 63.9% |
| 3750837 | 4004.1.1.0 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like | 0.53 | 46.0 | 3.47e-01 | 100.0% | 64.4% |
| 3940677 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.52 | 38.0 | 2.77e-01 | 77.5% | 42.1% |
| 3389979 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.52 | 42.0 | 3.58e-01 | 90.1% | 75.0% |
| 3164015 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 35.0 | 3.04e-01 | 71.8% | 57.6% |
| 5022277 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.51 | 42.0 | 3.55e-01 | 94.4% | 85.4% |
| 3899290 | 11.1.1.1054 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26562 | 0.51 | 36.0 | 3.12e-01 | 76.1% | 91.3% |
| 3534592 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 30.0 | 3.29e-01 | 84.5% | 74.5% |
| 3787952 | 213.1.1.29 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_9 | 0.50 | 38.0 | 2.92e-01 | 84.5% | 49.4% |