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SRR1747046_scaffold_29_prodigal-single.1__X__X__00076
Bact-VirSRR1747046_scaffold_29_prodigal-single.1__X__X__00076
Identity
- Kingdom:
- phage
Quality
41.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 200-260_277-329
D2
high
residues 527-579
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vvfA01 | 2.60.120.730 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 48.0 | 3.69e-01 | 94.3% | 80.1% |
| 3wdoA02 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 37.0 | 3.62e-01 | 77.4% | 80.3% |
| 6pvkD01 | 3.30.160.810 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 34.0 | 3.26e-01 | 77.4% | 53.1% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 184942 | 10.2.1.56 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › P2_N | 0.61 | 48.0 | 3.69e-01 | 94.3% | 80.1% |
| 4956935 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.56 | 42.0 | 3.39e-01 | 83.0% | 81.8% |
| 4176403 | 887.1.1.1 ↗ | a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal_L30 | 0.53 | 39.0 | 3.10e-01 | 84.9% | 85.6% |
| 4978132 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 38.0 | 2.97e-01 | 83.0% | 80.0% |
D3
medium
residues 1-179
D4
medium
residues 361-421
D5
medium
residues 422-510