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SRR1747046_scaffold_29_prodigal-single.1__X__X__00145
Bact-VirSRR1747046_scaffold_29_prodigal-single.1__X__X__00145
Identity
- Kingdom:
- phage
Quality
74.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 419-503
D2
medium
residues 22-119
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ayaA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.69 | 43.0 | 4.28e-01 | 86.7% | 60.4% |
| 2ci8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.69 | 40.0 | 5.02e-01 | 84.7% | 100.0% |
| 2eo6A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.66 | 41.0 | 4.03e-01 | 81.6% | 57.4% |
| 6pxcA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.65 | 42.0 | 4.17e-01 | 87.8% | 61.5% |
| 2kcqA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.62 | 44.0 | 3.75e-01 | 73.5% | 79.7% |
| 3buxB03 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.62 | 37.0 | 3.99e-01 | 79.6% | 68.6% |
| 3gxwC00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.60 | 41.0 | 4.11e-01 | 88.8% | 69.0% |
| 2xp1A02 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.60 | 38.0 | 4.12e-01 | 87.8% | 77.5% |
| 1xt9A00 | 3.40.395.10 | Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A | 0.56 | 45.0 | 3.54e-01 | 87.8% | 72.1% |
| 3tw8A01 | 3.30.450.200 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module | 0.54 | 40.0 | 3.58e-01 | 78.6% | 68.8% |
| 1uurA04 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 36.0 | 3.27e-01 | 87.8% | 49.6% |
| 2cxhA01 | 3.40.50.10480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain | 0.53 | 43.0 | 3.61e-01 | 88.8% | 90.2% |
| 2o95B00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.53 | 43.0 | 3.50e-01 | 86.7% | 85.8% |
| 6wo0A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.53 | 36.0 | 2.89e-01 | 70.4% | 62.0% |
| 2kksA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.52 | 42.0 | 3.67e-01 | 87.8% | 82.2% |
| 6upsA01 | 3.40.395.10 | Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A | 0.51 | 42.0 | 3.70e-01 | 92.9% | 92.3% |
| 1peaA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 41.0 | 3.40e-01 | 87.8% | 81.2% |
| 2iafA00 | 3.30.1330.90 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › D-3-phosphoglycerate dehydrogenase; domain 3 | 0.51 | 35.0 | 3.11e-01 | 70.4% | 76.4% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3624613 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.68 | 43.0 | 4.11e-01 | 87.8% | 54.8% |
| 3798360 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.68 | 43.0 | 4.24e-01 | 87.8% | 60.0% |
| 4550200 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.65 | 42.0 | 4.10e-01 | 87.8% | 58.2% |
| 1511313 | 214.1.1.3 ↗ | a+b two layers › SH2 › SH2 › SH2 › Cbl_N3 | 0.65 | 38.0 | 3.96e-01 | 71.4% | 62.2% |
| 3241996 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.63 | 38.0 | 3.69e-01 | 88.8% | 52.7% |
| 3249214 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.63 | 42.0 | 3.91e-01 | 88.8% | 55.0% |
| 3257384 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.63 | 41.0 | 4.02e-01 | 88.8% | 60.0% |
| 3397074 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.61 | 40.0 | 3.59e-01 | 88.8% | 47.4% |
| 3768834 | 214.1.1.3 ↗ | a+b two layers › SH2 › SH2 › SH2 › Cbl_N3 | 0.61 | 36.0 | 3.71e-01 | 76.5% | 60.0% |
| 1164309 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.60 | 38.0 | 3.97e-01 | 87.8% | 70.5% |
| 3287308 | 2008.1.1.20 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Uma2 | 0.57 | 46.0 | 3.65e-01 | 86.7% | 76.5% |
| 3622767 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.57 | 38.0 | 3.91e-01 | 85.7% | 70.5% |
| 3277044 | 2003.1.5.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PCMT | 0.57 | 42.0 | 3.04e-01 | 78.6% | 58.9% |
| 4162026 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.56 | 38.0 | 4.39e-01 | 73.5% | 98.6% |
| 3709439 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.55 | 39.0 | 4.21e-01 | 75.5% | 88.7% |
| 4934192 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.55 | 45.0 | 3.97e-01 | 87.8% | 86.4% |
| 5079388 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.54 | 45.0 | 3.62e-01 | 89.8% | 88.4% |
| 3684267 | 5.1.10.15 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › RPE65 | 0.54 | 28.0 | 2.60e-01 | 83.7% | 36.9% |
| 5000785 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.54 | 44.0 | 3.70e-01 | 89.8% | 87.6% |
| 3732125 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.53 | 46.0 | 3.81e-01 | 94.9% | 71.1% |
| 3880624 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.53 | 29.0 | 3.20e-01 | 75.5% | 65.0% |
| 3597599 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.53 | 40.0 | 3.98e-01 | 80.6% | 78.0% |
| 3699899 | 214.1.1.6 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2_2 | 0.52 | 39.0 | 3.72e-01 | 80.6% | 67.5% |
| 3260957 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.51 | 38.0 | 3.55e-01 | 88.8% | 60.8% |
| 4314973 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.51 | 33.0 | 2.78e-01 | 87.8% | 34.2% |
| None | — | 0.51 | 40.0 | 3.05e-01 | 85.7% | 58.3% | |
| 4972514 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.50 | 41.0 | 3.63e-01 | 87.8% | 86.4% |
| 3190706 | 874.1.1.1 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain › SMC_hinge | 0.50 | 41.0 | 3.29e-01 | 87.8% | 80.0% |