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SRR1747046_scaffold_29_prodigal-single.1__X__X__00212

Bact-Vir

SRR1747046_scaffold_29_prodigal-single.1__X__X__00212

Identity

Kingdom:
phage

Quality

87.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 48-132
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6ajpA00 3.40.470.10 Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain 0.76 70.0 5.17e-01 100.0% 44.7%
1ui0A00 3.40.470.10 Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain 0.75 69.0 5.22e-01 100.0% 46.4%
2d3yA00 3.40.470.10 Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain 0.72 66.0 4.82e-01 100.0% 53.9%
1wywA00 3.40.470.10 Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain 0.65 57.0 4.29e-01 98.8% 43.5%
3mwyW04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 43.0 3.02e-01 71.8% 89.2%
2fm7A00 3.30.429.10 Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor 0.55 33.0 3.69e-01 75.3% 80.6%
4lhpF00 3.30.429.10 Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor 0.55 39.0 3.45e-01 81.2% 49.2%
2e85B00 3.40.50.1450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HybD-like 0.50 38.0 3.20e-01 83.5% 52.9%
3kzwA01 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.50 34.0 2.86e-01 71.8% 73.4%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4962559 7569.1.1.1 ↗ a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.77 69.0 5.28e-01 100.0% 44.9%
3965875 7569.1.1.1 ↗ a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.77 69.0 5.57e-01 100.0% 52.5%
4937539 7569.1.1.1 ↗ a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.76 69.0 5.32e-01 100.0% 45.9%
5021506 7569.1.1.1 ↗ a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.75 67.0 5.17e-01 100.0% 44.9%
3057088 7569.1.1.1 ↗ a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.75 69.0 5.07e-01 100.0% 42.8%
4968429 7569.1.1.1 ↗ a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.75 69.0 5.24e-01 100.0% 46.8%
4943408 7569.1.1.1 ↗ a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.75 68.0 5.13e-01 100.0% 44.0%
4352085 7569.1.1.1 ↗ a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.75 68.0 5.10e-01 100.0% 42.5%
3960892 7569.1.1.1 ↗ a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.73 66.0 5.05e-01 100.0% 47.4%
3590878 7569.1.1.1 ↗ a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.72 65.0 4.88e-01 100.0% 48.1%
4346155 7569.1.1.0 ↗ a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like 0.71 65.0 4.54e-01 100.0% 58.9%
3839117 7569.1.1.1 ↗ a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.63 56.0 4.40e-01 100.0% 47.2%
3269018 7515.1.1.0 ↗ a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like 0.51 38.0 2.75e-01 78.8% 85.1%