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SRR1747046_scaffold_4_prodigal-single.1__X__X__00024
Bact-VirSRR1747046_scaffold_4_prodigal-single.1__X__X__00024
Identity
- Kingdom:
- phage
Quality
84.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-133
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 35.0 | 4.22e-01 | 93.8% | 81.6% |
| 1dmlA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.61 | 54.0 | 4.16e-01 | 100.0% | 82.8% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 32.0 | 3.93e-01 | 93.8% | 83.1% |
| 5exvC00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.60 | 42.0 | 3.75e-01 | 73.5% | 78.2% |
| 2hqvA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.60 | 41.0 | 3.61e-01 | 71.7% | 71.5% |
| 1b77A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.59 | 53.0 | 4.25e-01 | 100.0% | 82.0% |
| 2oviA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.59 | 42.0 | 3.76e-01 | 72.6% | 79.1% |
| 1ugiD00 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.59 | 37.0 | 4.21e-01 | 95.6% | 86.6% |
| 4dm5A00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.56 | 36.0 | 4.09e-01 | 98.2% | 85.1% |
| 1u9tA02 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.53 | 40.0 | 3.52e-01 | 79.6% | 86.4% |
| 3ci0J01 | 3.10.610.10 | Alpha Beta › Roll › Pili subunits › GSPII I/J protein-like | 0.53 | 35.0 | 3.63e-01 | 95.6% | 72.1% |
| 1d1jB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.52 | 46.0 | 4.30e-01 | 100.0% | 77.9% |
| 1e50B00 | 2.40.250.10 | Mainly Beta › Beta Barrel › Polyomavirus Enhancer Binding Protein 2; Chain: A; › Core binding factor, beta subunit | 0.52 | 42.0 | 4.04e-01 | 100.0% | 76.2% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5053966 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.64 | 34.0 | 3.91e-01 | 95.6% | 69.4% |
| 5019858 | 881.4.1.2 ↗ | a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB › DUF4367 | 0.60 | 36.0 | 3.37e-01 | 100.0% | 47.9% |
| 4953412 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.60 | 39.0 | 3.78e-01 | 100.0% | 60.0% |
| 3961706 | 4.1.1.161 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4178 | 0.60 | 33.0 | 4.18e-01 | 95.6% | 93.8% |
| 2663669 | 4216.1.1.2 ↗ | a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › ChuX_HutX | 0.59 | 42.0 | 3.73e-01 | 72.6% | 76.9% |
| 4930594 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.59 | 33.0 | 4.03e-01 | 100.0% | 84.0% |
| 3705153 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 42.0 | 3.94e-01 | 100.0% | 60.7% |
| 3222106 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 45.0 | 4.41e-01 | 100.0% | 75.0% |
| 3484746 | 304.107.1.10 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › BBS7_pf | 0.59 | 40.0 | 4.13e-01 | 100.0% | 72.7% |
| 4380236 | 4216.1.1.2 ↗ | a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › ChuX_HutX | 0.58 | 41.0 | 3.55e-01 | 72.6% | 71.2% |
| 3783266 | 223.2.1.33 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 | 0.58 | 41.0 | 3.97e-01 | 100.0% | 66.4% |
| 5048999 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.56 | 36.0 | 3.36e-01 | 100.0% | 52.9% |
| 3252765 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.55 | 45.0 | 4.25e-01 | 100.0% | 73.3% |
| 3597443 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.54 | 40.0 | 3.61e-01 | 100.0% | 57.3% |
| 3907293 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.54 | 36.0 | 3.71e-01 | 100.0% | 72.4% |
| 3914585 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.53 | 35.0 | 3.69e-01 | 100.0% | 73.3% |
| 3287652 | 3844.2.1.1 ↗ | a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG | 0.52 | 46.0 | 3.52e-01 | 100.0% | 44.4% |
| 3295586 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.51 | 41.0 | 3.60e-01 | 100.0% | 58.8% |
| 3232539 | 390.1.1.7 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_3 | 0.50 | 31.0 | 3.05e-01 | 99.1% | 57.5% |