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SRR1747046_scaffold_4_prodigal-single.1__X__X__00050
Bact-VirSRR1747046_scaffold_4_prodigal-single.1__X__X__00050
Identity
- Kingdom:
- phage
Quality
73.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-225
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1f7uA02 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.60 | 29.0 | 3.70e-01 | 99.5% | 76.0% |
| 1yjgA00 | 1.20.120.240 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Lipoprotein, type 6 | 0.60 | 32.0 | 3.81e-01 | 91.7% | 73.2% |
| 2zxeA02 | 1.20.1110.10 | Mainly Alpha › Up-down Bundle › Calcium-transporting ATPase, transmembrane domain › Calcium-transporting ATPase, transmembrane domain | 0.53 | 41.0 | 3.37e-01 | 80.7% | 59.6% |
| 3bt5A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.51 | 32.0 | 3.78e-01 | 70.2% | 89.4% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1005563 | 3565.1.1.1 ↗ | alpha bundles › Na/H pumping membrane integral pyrophosphatase › Na/H pumping membrane integral pyrophosphatase › Na/H pumping membrane integral pyrophosphatase › H_PPase | 0.63 | 45.0 | 3.10e-01 | 72.5% | 97.8% |
| 4019703 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.59 | 43.0 | 4.74e-01 | 74.3% | 98.3% |
| 3579611 | 3883.1.1.1 ↗ | alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf | 0.58 | 39.0 | 4.10e-01 | 73.4% | 73.5% |
| 3723424 | 1174.1.1.2 ↗ | alpha complex topology › Potassium channel TMEM175 › Potassium channel TMEM175 › Potassium channel TMEM175 › LtrA | 0.56 | 37.0 | 3.83e-01 | 78.9% | 68.8% |
| 3912477 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.50 | 44.0 | 3.88e-01 | 93.1% | 82.2% |
| 3189017 | 5001.1.1.131 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › DUF7702 | 0.50 | 44.0 | 4.16e-01 | 95.0% | 93.6% |