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SRR1747046_scaffold_4_prodigal-single.1__X__X__00097
Bact-VirSRR1747046_scaffold_4_prodigal-single.1__X__X__00097
Identity
- Kingdom:
- phage
Quality
57.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-68
D2
high
residues 175-294
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wp8A02 | 2.150.10.10 | Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal | 0.66 | 57.0 | 5.25e-01 | 93.3% | 92.8% |
| 5hy7B02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 43.0 | 3.26e-01 | 94.2% | 56.4% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1503827 | 208.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › YadA_head | 0.59 | 54.0 | 4.32e-01 | 100.0% | 59.1% |
| 3498556 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 44.0 | 3.13e-01 | 89.2% | 65.8% |
D3
medium
residues 537-583
Domain cluster:
representative
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ms4A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.72 | 61.0 | 4.09e-01 | 100.0% | 34.0% |
| 2oq1A03 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.70 | 55.0 | 4.44e-01 | 91.5% | 52.0% |
| 4ms4B02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 58.0 | 3.98e-01 | 100.0% | 32.2% |
| 1wquA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.68 | 54.0 | 4.20e-01 | 91.5% | 42.1% |
| 3hutA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 56.0 | 3.98e-01 | 95.7% | 34.7% |
| 2ci9B00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.68 | 53.0 | 4.33e-01 | 91.5% | 52.0% |
| 2cs0A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.68 | 53.0 | 4.36e-01 | 91.5% | 52.6% |
| 3lkbA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 56.0 | 3.91e-01 | 100.0% | 33.5% |
| 1xezA01 | 3.30.110.130 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hemolytic toxin, N-terminal domain | 0.63 | 50.0 | 4.31e-01 | 93.6% | 95.1% |
| 1h9oA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.63 | 50.0 | 4.04e-01 | 97.9% | 52.8% |
| 7xoiD01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.61 | 44.0 | 3.51e-01 | 80.9% | 59.8% |
| 1ym5A01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.61 | 50.0 | 3.71e-01 | 97.9% | 64.7% |
| 1e88A03 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.60 | 41.0 | 4.28e-01 | 83.0% | 83.3% |
| 3w0eA00 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.60 | 43.0 | 3.94e-01 | 78.7% | 100.0% |
| 7xkcA01 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.60 | 42.0 | 3.68e-01 | 78.7% | 80.2% |
| 1p9eA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.60 | 47.0 | 3.02e-01 | 97.9% | 26.2% |
| 1vbfA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 46.0 | 3.14e-01 | 97.9% | 55.4% |
| 2a1vA00 | 3.90.1150.30 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.59 | 39.0 | 2.90e-01 | 95.7% | 23.9% |
| 1l8rA00 | 3.10.260.20 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski | 0.59 | 40.0 | 3.15e-01 | 100.0% | 31.7% |
| 1cseI00 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.59 | 42.0 | 3.95e-01 | 78.7% | 63.5% |
| 1a10I00 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.59 | 42.0 | 3.95e-01 | 80.9% | 65.1% |
| 2py5A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 46.0 | 3.17e-01 | 95.7% | 23.4% |
| 6u5vB07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.59 | 46.0 | 3.38e-01 | 87.2% | 63.6% |
| 3k0xA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 45.0 | 3.73e-01 | 93.6% | 78.8% |
| 4zo2A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.58 | 45.0 | 2.88e-01 | 95.7% | 25.9% |
| 3u50C01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 42.0 | 3.33e-01 | 89.4% | 95.3% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.57 | 45.0 | 3.11e-01 | 89.4% | 30.5% |
| 1y7bA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.57 | 43.0 | 2.64e-01 | 85.1% | 12.6% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 41.0 | 3.68e-01 | 78.7% | 70.1% |
| 3o0wA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 47.0 | 3.08e-01 | 100.0% | 32.1% |
| 2pmeA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.56 | 43.0 | 2.73e-01 | 95.7% | 26.7% |
| 2rfrA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 47.0 | 3.31e-01 | 97.9% | 31.2% |
| 1p9rA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.55 | 39.0 | 3.18e-01 | 85.1% | 34.2% |
| 1sz2A02 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.55 | 41.0 | 2.81e-01 | 85.1% | 26.0% |
| 4bi3A01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.55 | 43.0 | 3.73e-01 | 100.0% | 82.4% |
| 4g2sA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.55 | 45.0 | 3.58e-01 | 97.9% | 70.8% |
| 3cnrB00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.55 | 43.0 | 3.64e-01 | 97.9% | 89.2% |
| 6ijfC01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.54 | 41.0 | 3.60e-01 | 100.0% | 80.6% |
| 4fd0A01 | 2.60.40.3630 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 35.0 | 3.06e-01 | 70.2% | 39.2% |
| 3dqpA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 44.0 | 2.94e-01 | 97.9% | 50.9% |
| 4rm7A02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.53 | 40.0 | 3.29e-01 | 95.7% | 88.1% |
| 3ossC00 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 38.0 | 3.48e-01 | 97.9% | 56.9% |
| 2dr3A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 41.0 | 2.80e-01 | 100.0% | 82.8% |
| 2qm4A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.52 | 40.0 | 3.08e-01 | 97.9% | 87.4% |
| 5bukB00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 42.0 | 2.52e-01 | 100.0% | 40.1% |
| 8db3B02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 43.0 | 2.90e-01 | 100.0% | 84.6% |
| 3g1jA00 | 2.30.30.350 | Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. | 0.52 | 39.0 | 3.27e-01 | 85.1% | 72.2% |
| 1txdA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 41.0 | 3.17e-01 | 97.9% | 45.5% |
| 3payB02 | 2.60.40.2090 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 40.0 | 3.06e-01 | 97.9% | 95.5% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4993841 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.76 | 65.0 | 4.70e-01 | 97.9% | 44.0% |
| 4994059 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.74 | 64.0 | 4.62e-01 | 97.9% | 75.6% |
| 5049198 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.73 | 62.0 | 4.30e-01 | 97.9% | 39.3% |
| 3298233 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.73 | 62.0 | 4.36e-01 | 100.0% | 36.1% |
| 3310464 | 375.1.1.69 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_12 | 0.71 | 52.0 | 5.14e-01 | 78.7% | 76.0% |
| 4977613 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.71 | 58.0 | 4.32e-01 | 100.0% | 40.7% |
| 3890372 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.71 | 56.0 | 4.38e-01 | 91.5% | 48.2% |
| 5070642 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.71 | 61.0 | 3.99e-01 | 100.0% | 28.8% |
| 5081359 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.71 | 61.0 | 4.20e-01 | 100.0% | 63.5% |
| 5074348 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.70 | 60.0 | 4.37e-01 | 100.0% | 72.1% |
| 5068304 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.70 | 58.0 | 4.17e-01 | 97.9% | 70.7% |
| 3506772 | 214.1.1.10 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7145 | 0.69 | 54.0 | 4.11e-01 | 91.5% | 38.4% |
| 5045133 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.69 | 56.0 | 4.21e-01 | 100.0% | 42.2% |
| 3618546 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.69 | 54.0 | 4.16e-01 | 91.5% | 43.5% |
| 4996288 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.68 | 57.0 | 4.19e-01 | 97.9% | 45.2% |
| 3496362 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.67 | 54.0 | 3.76e-01 | 93.6% | 30.6% |
| 3518947 | 214.1.1.10 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7145 | 0.67 | 53.0 | 4.02e-01 | 91.5% | 40.0% |
| 4030408 | 2003.1.5.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PCMT | 0.67 | 55.0 | 3.64e-01 | 97.9% | 62.9% |
| 4555099 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.67 | 52.0 | 5.04e-01 | 89.4% | 98.2% |
| 3838657 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.67 | 56.0 | 4.01e-01 | 100.0% | 34.4% |
| 3989707 | 214.1.1.8 ↗ | a+b two layers › SH2 › SH2 › SH2 › TnpB_IS66 | 0.66 | 54.0 | 4.52e-01 | 97.9% | 70.0% |
| 3905730 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.66 | 52.0 | 4.02e-01 | 91.5% | 41.7% |
| 3238926 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.66 | 53.0 | 3.72e-01 | 100.0% | 31.7% |
| 4623713 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.65 | 55.0 | 3.89e-01 | 97.9% | 56.9% |
| 3875424 | 5.1.4.428 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, LLGL, Lgl_C | 0.65 | 49.0 | 2.68e-01 | 85.1% | 7.2% |
| 4972053 | 7575.1.1.0 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like | 0.65 | 53.0 | 3.20e-01 | 100.0% | 18.1% |
| 3385678 | 2003.1.5.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PCMT | 0.65 | 51.0 | 3.52e-01 | 100.0% | 58.8% |
| 5059574 | 7575.1.1.4 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C11 | 0.64 | 53.0 | 3.16e-01 | 100.0% | 16.2% |
| 5053120 | 7584.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins | 0.63 | 51.0 | 3.10e-01 | 100.0% | 19.5% |
| 5023585 | 2007.1.1.15 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › DUF2124 | 0.63 | 50.0 | 3.70e-01 | 95.7% | 38.0% |
| 3991271 | 1.1.9.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_NSUN2 | 0.63 | 48.0 | 4.19e-01 | 89.4% | 88.7% |
| None | — | 0.63 | 51.0 | 3.46e-01 | 100.0% | 57.7% | |
| 3585382 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.63 | 46.0 | 2.67e-01 | 85.1% | 13.6% |
| 3583928 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.62 | 49.0 | 4.01e-01 | 97.9% | 48.6% |
| 3972532 | 294.1.1.2 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › Inhibitor_I78 | 0.62 | 44.0 | 4.08e-01 | 76.6% | 60.9% |
| 4052309 | 7528.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_II | 0.62 | 49.0 | 3.85e-01 | 95.7% | 83.5% |
| 4610617 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.61 | 49.0 | 3.23e-01 | 100.0% | 19.5% |
| 3674451 | 294.1.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › potato_inhibit | 0.61 | 44.0 | 4.06e-01 | 80.9% | 61.5% |
| 3196538 | 294.1.1.2 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › Inhibitor_I78 | 0.60 | 43.0 | 3.86e-01 | 76.6% | 55.1% |
| 3243571 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.60 | 45.0 | 3.17e-01 | 91.5% | 36.3% |
| 3741562 | 294.1.1.2 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › Inhibitor_I78 | 0.60 | 43.0 | 3.99e-01 | 76.6% | 60.3% |
| 3413161 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.60 | 44.0 | 2.61e-01 | 89.4% | 14.4% |
| 3967506 | 300.1.1.8 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 | 0.59 | 50.0 | 3.16e-01 | 95.7% | 58.7% |
| 5040467 | 2003.1.5.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PCMT | 0.59 | 47.0 | 3.14e-01 | 100.0% | 47.8% |
| 4548850 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 47.0 | 2.83e-01 | 100.0% | 49.8% |
| 3974984 | 219.1.1.67 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › ElaD-SseL-like_C,ElaD_SseL-like_N | 0.59 | 46.0 | 2.94e-01 | 100.0% | 20.6% |
| 4180412 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.58 | 38.0 | 3.12e-01 | 97.9% | 34.4% |
| 4312484 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.58 | 44.0 | 3.65e-01 | 95.7% | 97.1% |
| 4048866 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.58 | 44.0 | 3.30e-01 | 93.6% | 45.3% |
| 3786096 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.58 | 40.0 | 2.69e-01 | 100.0% | 17.9% |
| 3605940 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.57 | 45.0 | 2.85e-01 | 93.6% | 35.0% |
| 3229011 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.57 | 43.0 | 3.16e-01 | 95.7% | 28.3% |
| 3251582 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.57 | 39.0 | 3.04e-01 | 100.0% | 30.9% |
| 4963016 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 37.0 | 3.80e-01 | 95.7% | 73.3% |
| 4032585 | 884.1.1.1 ↗ | a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › CobW_C | 0.55 | 42.0 | 3.79e-01 | 100.0% | 67.1% |
| 5052070 | 7528.1.1.0 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains | 0.55 | 42.0 | 3.56e-01 | 97.9% | 84.0% |
| None | — | 0.55 | 41.0 | 2.74e-01 | 95.7% | 28.2% | |
| 3574976 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.54 | 41.0 | 3.98e-01 | 89.4% | 94.5% |
| 3912151 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.54 | 40.0 | 3.56e-01 | 80.9% | 67.6% |
| 3502916 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.54 | 44.0 | 3.21e-01 | 100.0% | 98.7% |
| 3698968 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.54 | 41.0 | 2.68e-01 | 91.5% | 73.1% |
| 3290454 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.54 | 43.0 | 2.76e-01 | 100.0% | 50.9% |
| 5032659 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.53 | 42.0 | 2.77e-01 | 100.0% | 79.5% |
| 3405538 | 219.1.1.111 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core, Rad4 | 0.53 | 45.0 | 2.77e-01 | 97.9% | 52.9% |
| 3498726 | 884.1.1.1 ↗ | a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › CobW_C | 0.53 | 41.0 | 3.44e-01 | 100.0% | 65.7% |
| 3917584 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.53 | 39.0 | 3.48e-01 | 80.9% | 62.9% |
| 3370517 | 109.1.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_2 | 0.52 | 37.0 | 2.66e-01 | 100.0% | 23.1% |
| 3739363 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.52 | 42.0 | 3.13e-01 | 97.9% | 62.9% |
| 3273587 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.52 | 40.0 | 2.47e-01 | 93.6% | 13.3% |
| 4017762 | 2.1.1.230 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF26639 | 0.50 | 42.0 | 2.91e-01 | 93.6% | 93.6% |