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SRR1747052_scaffold_19_prodigal-single.1__X__X__00019

Bact-Vir

SRR1747052_scaffold_19_prodigal-single.1__X__X__00019

Identity

Kingdom:
phage

Quality

37.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-61
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2e5yA02 1.20.5.440 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain 0.71 44.0 4.82e-01 98.2% 77.8%
4n18A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.63 48.0 3.73e-01 85.5% 85.9%
4ed9A01 3.40.50.10540 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.56 45.0 2.95e-01 96.4% 61.5%
2x0nA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 45.0 3.16e-01 90.9% 94.0%
4nkwA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.54 44.0 2.61e-01 92.7% 32.3%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
7858 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.62 50.0 3.14e-01 94.5% 95.1%
None — 0.55 44.0 2.71e-01 89.1% 48.0%
D2 high residues 335-387
PDB