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SRR1747052_scaffold_19_prodigal-single.1__X__X__00053
Bact-VirSRR1747052_scaffold_19_prodigal-single.1__X__X__00053
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-133
Domain cluster:
rep: NC_073478.1__YP_010756034.1__QEJ63_gp21__00021__D6-101
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vugA05 | 3.30.70.3360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 31.0 | 4.08e-01 | 100.0% | 91.7% |
| 3fqmA02 | 2.20.25.220 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C virus NS5A, 1B domain | 0.61 | 31.0 | 3.37e-01 | 100.0% | 58.1% |
| 2nyiA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.56 | 31.0 | 3.23e-01 | 100.0% | 56.7% |
| 2f8xC02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 46.0 | 4.01e-01 | 93.0% | 76.6% |
| 1xrsB01 | 3.30.30.60 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain | 0.55 | 30.0 | 3.77e-01 | 100.0% | 98.1% |
| 3luyA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.54 | 31.0 | 3.24e-01 | 100.0% | 59.6% |
| 3nlcA01 | 3.30.70.2700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 31.0 | 3.39e-01 | 100.0% | 73.7% |
| 1n4kA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 38.0 | 3.44e-01 | 80.0% | 88.7% |
| 1nj1A03 | 3.30.110.30 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › C-terminal domain of ProRS | 0.51 | 34.0 | 3.95e-01 | 100.0% | 98.6% |
| 3a27A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 38.0 | 3.04e-01 | 82.0% | 72.1% |
| 2l8yA00 | 3.30.110.70 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B | 0.50 | 31.0 | 3.10e-01 | 100.0% | 58.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4941686 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.62 | 34.0 | 3.88e-01 | 100.0% | 72.9% |
| 3229759 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.58 | 32.0 | 3.71e-01 | 99.0% | 78.5% |
| 5002609 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 36.0 | 3.70e-01 | 100.0% | 66.3% |
| 4992122 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.56 | 32.0 | 3.55e-01 | 100.0% | 72.0% |
| 4994093 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.55 | 35.0 | 2.94e-01 | 100.0% | 37.6% |
| 4996340 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.54 | 30.0 | 3.32e-01 | 100.0% | 66.3% |
| 4955569 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.54 | 37.0 | 3.11e-01 | 70.0% | 50.3% |
| 3838460 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.53 | 29.0 | 3.21e-01 | 100.0% | 63.7% |
| 5078753 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.53 | 37.0 | 3.11e-01 | 71.0% | 53.5% |
| 3716774 | 306.5.1.2 ↗ | a+b two layers › Glucose permease domain IIB-like › GTP cyclohydrolase I feedback regulatory protein, GFRP › GTP cyclohydrolase I feedback regulatory protein, GFRP › PF28980 | 0.52 | 46.0 | 4.43e-01 | 100.0% | 97.4% |
| 4022161 | 101.1.2.703 ↗ | alpha arrays › HTH › HTH › winged helix domain › Methyltransf_PK | 0.51 | 33.0 | 3.34e-01 | 100.0% | 64.0% |
| 3605297 | 306.10.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 | 0.51 | 45.0 | 4.22e-01 | 100.0% | 96.8% |