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SRR1747052_scaffold_19_prodigal-single.1__X__X__00130

Bact-Vir

SRR1747052_scaffold_19_prodigal-single.1__X__X__00130

Identity

Kingdom:
phage

Quality

70.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-138
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5cqgA05 1.10.357.90 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Telomerase reverse transcriptase (TERT), thumb domain 0.55 40.0 3.62e-01 75.6% 75.1%
3rlbA00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.55 41.0 3.77e-01 77.8% 86.4%
2hujA00 1.20.120.440 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like 0.50 34.0 3.50e-01 83.7% 73.6%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5019263 4953.1.1.0 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.56 33.0 3.78e-01 70.4% 77.0%
4986335 601.1.1.154 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Na_Ca_ex 0.55 37.0 3.73e-01 93.3% 67.4%
3587011 604.39.1.23 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › Hpre_diP_synt_I 0.52 39.0 3.57e-01 77.8% 81.1%
3588464 604.39.1.5 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF_trnsprt 0.50 38.0 3.51e-01 77.8% 84.7%
D2 high residues 145-255
PDB