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SRR1747052_scaffold_19_prodigal-single.1__X__X__00230
Bact-VirSRR1747052_scaffold_19_prodigal-single.1__X__X__00230
Identity
- Kingdom:
- phage
Quality
77.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-125
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4rs8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 54.0 | 6.02e-01 | 70.1% | 92.9% |
| 1stzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 53.0 | 5.85e-01 | 70.1% | 92.9% |
| 6uvuA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 52.0 | 5.36e-01 | 71.0% | 73.1% |
| 1xmkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 48.0 | 5.56e-01 | 86.0% | 88.6% |
| 6pcoC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 53.0 | 4.90e-01 | 72.0% | 72.7% |
| 4hqeA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 51.0 | 5.20e-01 | 70.1% | 76.2% |
| 2fswA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 51.0 | 5.30e-01 | 71.0% | 75.5% |
| 2l02A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 50.0 | 5.64e-01 | 75.7% | 90.2% |
| 3df8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 51.0 | 5.12e-01 | 71.0% | 69.7% |
| 1r7jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 49.0 | 5.33e-01 | 72.9% | 81.1% |
| 1in4A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 48.0 | 5.62e-01 | 81.3% | 97.3% |
| 3k69A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 52.0 | 4.56e-01 | 72.9% | 90.7% |
| 3oopA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 53.0 | 4.87e-01 | 75.7% | 67.9% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 51.0 | 5.44e-01 | 73.8% | 90.5% |
| 4gcvC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 52.0 | 4.72e-01 | 75.7% | 71.6% |
| 2do7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 48.0 | 5.50e-01 | 71.0% | 92.5% |
| 2l01A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 42.0 | 4.89e-01 | 91.6% | 83.1% |
| 5zyrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 49.0 | 4.34e-01 | 71.0% | 81.5% |
| 3e6mA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 54.0 | 4.86e-01 | 81.3% | 83.6% |
| 2nyxB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 53.0 | 4.80e-01 | 79.4% | 91.5% |
| 2fbkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 48.0 | 4.24e-01 | 72.0% | 57.1% |
| 3cjnA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 53.0 | 4.78e-01 | 81.3% | 82.2% |
| 4b8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 51.0 | 4.63e-01 | 76.6% | 88.6% |
| 3u1dB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 58.0 | 5.22e-01 | 89.7% | 84.6% |
| 2fxaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 54.0 | 4.74e-01 | 83.2% | 86.5% |
| 2mc3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 52.0 | 5.32e-01 | 79.4% | 91.3% |
| 1ucrB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 46.0 | 5.38e-01 | 94.4% | 98.7% |
| 2rdpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 51.0 | 4.68e-01 | 79.4% | 86.4% |
| 3s2wG00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 51.0 | 4.77e-01 | 79.4% | 89.5% |
| 2a5yC03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 51.0 | 5.11e-01 | 80.4% | 82.9% |
| 3nrvB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 54.0 | 5.04e-01 | 84.1% | 89.1% |
| 2fbiA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 52.0 | 4.76e-01 | 80.4% | 89.7% |
| 2a61B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 51.0 | 4.64e-01 | 78.5% | 87.6% |
| 3dpuA03 | 1.10.10.2200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.66 | 43.0 | 4.94e-01 | 93.5% | 93.3% |
| 2esnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 43.0 | 4.63e-01 | 70.1% | 79.8% |
| 4rgxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 49.0 | 4.59e-01 | 81.3% | 87.3% |
| 2doaA00 | 1.10.10.2670 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › E3 ubiquitin-protein ligase | 0.64 | 54.0 | 5.50e-01 | 98.1% | 96.2% |
| 2bgcA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 53.0 | 5.44e-01 | 89.7% | 100.0% |
| 5w3gA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 42.0 | 4.24e-01 | 71.0% | 93.6% |
| 2iw5B00 | 1.20.58.1880 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 37.0 | 3.44e-01 | 99.1% | 50.4% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5044888 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.80 | 56.0 | 5.07e-01 | 79.4% | 55.0% |
| 4989447 | 101.1.2.927 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7347 | 0.79 | 52.0 | 5.71e-01 | 71.0% | 80.9% |
| 5077926 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.79 | 55.0 | 5.05e-01 | 72.9% | 57.0% |
| 3492410 | 101.1.2.82 ↗ | alpha arrays › HTH › HTH › winged helix domain › TBPIP | 0.78 | 49.0 | 4.54e-01 | 84.1% | 51.1% |
| 5048467 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 53.0 | 4.74e-01 | 72.9% | 51.7% |
| 5051833 | 101.1.2.143 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_34 | 0.76 | 54.0 | 5.85e-01 | 72.9% | 92.2% |
| 4927721 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.76 | 52.0 | 5.11e-01 | 70.1% | 67.8% |
| 5057033 | 101.1.2.751 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6293_C | 0.76 | 52.0 | 5.54e-01 | 71.0% | 78.9% |
| 4977918 | 101.1.2.210 ↗ | alpha arrays › HTH › HTH › winged helix domain › CggR_N | 0.76 | 53.0 | 5.62e-01 | 74.8% | 81.1% |
| 4929103 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.76 | 53.0 | 5.53e-01 | 72.9% | 83.0% |
| 5027549 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.75 | 47.0 | 5.38e-01 | 86.0% | 83.7% |
| 5041252 | 101.1.2.673 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N | 0.75 | 46.0 | 5.42e-01 | 94.4% | 88.0% |
| 3488598 | 101.1.2.601 ↗ | alpha arrays › HTH › HTH › winged helix domain › TBPIP, LZ3wCH | 0.75 | 50.0 | 3.97e-01 | 86.0% | 36.9% |
| 4959083 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 51.0 | 4.32e-01 | 71.0% | 44.1% |
| 3710117 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 52.0 | 5.64e-01 | 76.6% | 85.6% |
| 5048434 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 50.0 | 5.30e-01 | 84.1% | 76.8% |
| 5040773 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.74 | 50.0 | 5.33e-01 | 86.9% | 77.9% |
| 3281724 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.74 | 51.0 | 4.87e-01 | 71.0% | 62.4% |
| 4429289 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 50.0 | 5.11e-01 | 70.1% | 70.5% |
| 3280479 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.74 | 51.0 | 5.50e-01 | 73.8% | 83.3% |
| 5071120 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.74 | 51.0 | 5.72e-01 | 72.0% | 92.9% |
| 4251290 | 101.1.2.573 ↗ | alpha arrays › HTH › HTH › winged helix domain › NPHP3_hel | 0.73 | 56.0 | 5.80e-01 | 80.4% | 96.0% |
| 4944651 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 53.0 | 4.61e-01 | 74.8% | 51.6% |
| 3636231 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 54.0 | 5.30e-01 | 77.6% | 76.5% |
| 5053372 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.73 | 52.0 | 4.72e-01 | 73.8% | 95.7% |
| 4013939 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 55.0 | 4.72e-01 | 79.4% | 90.3% |
| 4943276 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.72 | 53.0 | 4.80e-01 | 75.7% | 69.8% |
| 4964883 | 101.1.2.945 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF26491 | 0.72 | 51.0 | 5.29e-01 | 72.9% | 88.0% |
| 3645693 | 101.1.2.516 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25895 | 0.72 | 53.0 | 5.46e-01 | 78.5% | 82.0% |
| 4974684 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 57.0 | 5.93e-01 | 84.1% | 100.0% |
| 3409047 | 101.1.2.219 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dark_WHD | 0.71 | 48.0 | 5.29e-01 | 74.8% | 87.1% |
| 4947701 | 101.1.2.882 ↗ | alpha arrays › HTH › HTH › winged helix domain › FeoA | 0.71 | 56.0 | 5.80e-01 | 92.5% | 90.0% |
| 4011979 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 53.0 | 5.07e-01 | 79.4% | 88.0% |
| 3780643 | 101.1.2.36 ↗ | alpha arrays › HTH › HTH › winged helix domain › z-alpha | 0.70 | 49.0 | 5.54e-01 | 90.7% | 95.0% |
| 3310101 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.70 | 51.0 | 5.01e-01 | 76.6% | 87.0% |
| 4968035 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.70 | 54.0 | 5.65e-01 | 81.3% | 92.9% |
| 3320650 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.69 | 51.0 | 5.25e-01 | 76.6% | 88.0% |
| 4992547 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.69 | 52.0 | 5.03e-01 | 79.4% | 91.7% |
| 3270814 | 101.1.2.82 ↗ | alpha arrays › HTH › HTH › winged helix domain › TBPIP | 0.68 | 48.0 | 5.48e-01 | 86.0% | 96.2% |
| 4061251 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 44.0 | 4.88e-01 | 70.1% | 83.5% |
| 4948660 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.66 | 52.0 | 5.35e-01 | 81.3% | 91.0% |
| 5032313 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.66 | 54.0 | 5.37e-01 | 86.9% | 89.1% |
| 3968880 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 48.0 | 4.52e-01 | 75.7% | 77.6% |
| 5051837 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 49.0 | 3.98e-01 | 80.4% | 92.3% |
| 3616235 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 44.0 | 4.92e-01 | 71.0% | 95.0% |
| 3584275 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 52.0 | 5.35e-01 | 88.8% | 98.0% |
| 3990729 | 101.1.15.1 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS | 0.62 | 43.0 | 4.67e-01 | 71.0% | 85.6% |
| 4991565 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.62 | 47.0 | 5.15e-01 | 94.4% | 95.6% |
| 4966124 | 101.1.2.924 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7342 | 0.62 | 53.0 | 4.67e-01 | 92.5% | 93.5% |
| 4030025 | 101.1.2.120 ↗ | alpha arrays › HTH › HTH › winged helix domain › DDRGK | 0.61 | 45.0 | 4.15e-01 | 77.6% | 80.0% |
| 3516202 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 42.0 | 4.49e-01 | 81.3% | 88.9% |
| 3262460 | 101.1.2.661 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_9, POLR3C_WHD | 0.56 | 46.0 | 3.14e-01 | 86.9% | 95.9% |
| 3491617 | 101.1.2.120 ↗ | alpha arrays › HTH › HTH › winged helix domain › DDRGK | 0.56 | 46.0 | 4.67e-01 | 95.3% | 89.5% |
| 5050915 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 47.0 | 3.22e-01 | 92.5% | 95.9% |
| 5050392 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.54 | 47.0 | 4.27e-01 | 92.5% | 87.9% |
| 5063358 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 43.0 | 4.38e-01 | 85.0% | 100.0% |
D2
high
residues 131-206
Domain cluster:
representative
CATH (80)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qfhA01 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.78 | 61.0 | 6.56e-01 | 93.4% | 98.5% |
| 2qv6B02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.76 | 67.0 | 5.67e-01 | 96.1% | 98.4% |
| 1lfpA03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.76 | 61.0 | 6.27e-01 | 93.4% | 90.4% |
| 1nxiA00 | 3.30.70.970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RraB-like | 0.75 | 65.0 | 5.41e-01 | 96.1% | 65.2% |
| 1f0xA01 | 3.30.70.610 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › D-lactate dehydrogenase, cap domain, subdomain 1 | 0.74 | 64.0 | 5.85e-01 | 94.7% | 89.0% |
| 3hluA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.74 | 62.0 | 6.30e-01 | 90.8% | 100.0% |
| 6tepC02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.74 | 61.0 | 4.65e-01 | 92.1% | 97.2% |
| 2wbmA03 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.74 | 61.0 | 6.36e-01 | 90.8% | 100.0% |
| 1gmuA01 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.74 | 53.0 | 5.60e-01 | 89.5% | 86.6% |
| 5wm1A02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.74 | 62.0 | 5.48e-01 | 92.1% | 79.8% |
| 6lpnA03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 63.0 | 5.49e-01 | 94.7% | 87.7% |
| 3dgpB00 | 3.30.70.1220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TFB5-like | 0.73 | 50.0 | 5.37e-01 | 75.0% | 85.7% |
| 1vi7A02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 61.0 | 6.26e-01 | 92.1% | 100.0% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.72 | 61.0 | 6.11e-01 | 93.4% | 100.0% |
| 1jihA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.72 | 62.0 | 4.57e-01 | 96.1% | 84.2% |
| 5kfnA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.72 | 62.0 | 4.70e-01 | 94.7% | 89.3% |
| 3v8vA01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.72 | 54.0 | 3.94e-01 | 90.8% | 29.2% |
| 7ahbB01 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.72 | 52.0 | 5.72e-01 | 86.8% | 100.0% |
| 3n79A01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.72 | 61.0 | 6.12e-01 | 96.1% | 100.0% |
| 1r6vA02 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.71 | 57.0 | 5.75e-01 | 90.8% | 85.9% |
| 1lxjA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 62.0 | 5.64e-01 | 97.4% | 81.6% |
| 1nm2A01 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.71 | 55.0 | 5.78e-01 | 94.7% | 95.6% |
| 3g87A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.71 | 58.0 | 6.06e-01 | 92.1% | 100.0% |
| 2jfdA03 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.70 | 54.0 | 5.72e-01 | 97.4% | 97.0% |
| 1s5jA03 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.70 | 59.0 | 4.67e-01 | 93.4% | 85.4% |
| 2ewhA01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.70 | 58.0 | 5.69e-01 | 93.4% | 92.9% |
| 1earA02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.70 | 52.0 | 5.41e-01 | 90.8% | 87.0% |
| 3ui3A02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 60.0 | 5.55e-01 | 96.1% | 87.8% |
| 1whvA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.70 | 57.0 | 5.18e-01 | 89.5% | 67.0% |
| 1h3dA03 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 55.0 | 5.74e-01 | 94.7% | 97.0% |
| 4dw8A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.70 | 53.0 | 4.75e-01 | 81.6% | 93.4% |
| 3tzyA02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.69 | 55.0 | 5.74e-01 | 97.4% | 95.7% |
| 1ufwA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.69 | 57.0 | 5.33e-01 | 92.1% | 89.5% |
| 2hg4D03 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.69 | 55.0 | 3.69e-01 | 97.4% | 22.2% |
| 3p3dA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.69 | 56.0 | 5.37e-01 | 89.5% | 92.0% |
| 2h5eA03 | 3.30.70.3280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptide chain release factor 3, domain III | 0.69 | 57.0 | 4.74e-01 | 92.1% | 51.8% |
| 4mz0B05 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.69 | 54.0 | 5.65e-01 | 92.1% | 97.0% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 54.0 | 5.74e-01 | 86.8% | 100.0% |
| 5uazA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.69 | 56.0 | 5.26e-01 | 90.8% | 86.2% |
| 1zpwX00 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 56.0 | 5.48e-01 | 97.4% | 84.1% |
| 1konA03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.68 | 54.0 | 5.52e-01 | 93.4% | 90.7% |
| 3ossD00 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.68 | 51.0 | 4.08e-01 | 81.6% | 41.4% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 56.0 | 5.45e-01 | 90.8% | 91.8% |
| 6k2eA01 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 55.0 | 5.73e-01 | 92.1% | 100.0% |
| 1s7hA01 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 58.0 | 5.78e-01 | 97.4% | 96.2% |
| 3aqpA02 | 3.30.70.3220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 58.0 | 4.59e-01 | 97.4% | 95.6% |
| 2ww4A02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.67 | 56.0 | 4.89e-01 | 93.4% | 90.8% |
| 3ldgA01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.67 | 58.0 | 4.31e-01 | 96.1% | 43.3% |
| 1bqnA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.67 | 53.0 | 5.01e-01 | 89.5% | 87.2% |
| 3ungC03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.67 | 57.0 | 4.84e-01 | 98.7% | 92.5% |
| 1vk8A00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 57.0 | 5.41e-01 | 100.0% | 88.2% |
| 7vxrA01 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.66 | 55.0 | 5.16e-01 | 94.7% | 75.5% |
| 3lduA01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.66 | 57.0 | 4.34e-01 | 96.1% | 46.7% |
| 6u9hF02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.66 | 55.0 | 5.51e-01 | 100.0% | 94.8% |
| 2fgcA03 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.66 | 54.0 | 5.43e-01 | 100.0% | 93.4% |
| 2m88A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.65 | 54.0 | 5.24e-01 | 93.4% | 86.0% |
| 6vu9A02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.65 | 51.0 | 3.51e-01 | 85.5% | 84.7% |
| 2i8eA01 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 54.0 | 5.45e-01 | 92.1% | 100.0% |
| 1vk1A02 | 3.30.1760.10 | Alpha Beta › 2-Layer Sandwich › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, domain 2 › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, domain 2 | 0.65 | 49.0 | 4.08e-01 | 80.3% | 75.4% |
| 1jg8A02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.65 | 49.0 | 4.56e-01 | 81.6% | 93.8% |
| 4i0wA00 | 3.30.70.2980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 53.0 | 5.01e-01 | 93.4% | 75.0% |
| 2amyA02 | 3.30.1240.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › Eukaryotic phosphomannomutase, cap domain | 0.65 | 49.0 | 4.52e-01 | 82.9% | 90.2% |
| 7veeA02 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.64 | 52.0 | 3.46e-01 | 94.7% | 21.4% |
| 1nf2A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.64 | 48.0 | 4.37e-01 | 82.9% | 93.4% |
| 1s48A04 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.63 | 53.0 | 4.71e-01 | 93.4% | 70.3% |
| 3jb9a02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.63 | 48.0 | 5.08e-01 | 86.8% | 100.0% |
| 1a7jA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 45.0 | 3.08e-01 | 78.9% | 21.1% |
| 2l9dA00 | 3.30.70.2340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein PF12112 family, DUF3579 | 0.61 | 50.0 | 4.49e-01 | 90.8% | 81.5% |
| 4ae5C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 52.0 | 4.18e-01 | 97.4% | 60.1% |
| 3m4xA01 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.61 | 45.0 | 4.31e-01 | 93.4% | 68.2% |
| 4r5zA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 45.0 | 3.83e-01 | 78.9% | 75.4% |
| 4jwoA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.60 | 46.0 | 3.80e-01 | 82.9% | 92.9% |
| 1s12A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.54 | 42.0 | 4.02e-01 | 89.5% | 89.4% |
| 2dchX02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.53 | 45.0 | 4.02e-01 | 97.4% | 66.7% |
| 1hqiA00 | 3.90.56.10 | Alpha Beta › Alpha-Beta Complex › Phenol Hydroxylase P2 Protein › Monooxygenase component MmoB/DmpM | 0.52 | 44.0 | 4.25e-01 | 96.1% | 97.8% |
| 3weoA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 41.0 | 2.77e-01 | 89.5% | 47.1% |
| 2r7cA02 | 3.30.428.20 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Rotavirus NSP2 fragment, C-terminal domain | 0.52 | 36.0 | 2.92e-01 | 73.7% | 66.9% |
| 8j50A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 40.0 | 2.75e-01 | 88.2% | 44.5% |
| 4q5eA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 39.0 | 3.97e-01 | 85.5% | 89.3% |
| 3thxB04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.51 | 35.0 | 3.05e-01 | 86.8% | 43.0% |
ECOD (98)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5047912 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.83 | 67.0 | 7.16e-01 | 88.2% | 100.0% |
| 4983407 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.82 | 66.0 | 7.07e-01 | 89.5% | 100.0% |
| 5011049 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.81 | 65.0 | 7.00e-01 | 88.2% | 100.0% |
| 3386186 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.81 | 69.0 | 6.62e-01 | 92.1% | 90.6% |
| 4285092 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.80 | 64.0 | 6.85e-01 | 89.5% | 100.0% |
| 5004165 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.80 | 66.0 | 6.82e-01 | 92.1% | 97.1% |
| 4934396 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.79 | 63.0 | 6.69e-01 | 88.2% | 100.0% |
| 4295716 | 304.117.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Transcrip_reg | 0.78 | 63.0 | 6.57e-01 | 93.4% | 92.9% |
| 5071628 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.78 | 64.0 | 6.69e-01 | 92.1% | 97.1% |
| 5040248 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.78 | 66.0 | 6.73e-01 | 92.1% | 98.7% |
| 5033768 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.78 | 62.0 | 6.61e-01 | 92.1% | 100.0% |
| 4988867 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.78 | 60.0 | 6.41e-01 | 90.8% | 96.9% |
| 5051914 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.78 | 65.0 | 6.74e-01 | 90.8% | 98.6% |
| 5035126 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.77 | 60.0 | 6.42e-01 | 85.5% | 96.9% |
| 4958999 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.77 | 61.0 | 6.52e-01 | 85.5% | 100.0% |
| 4949054 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.77 | 61.0 | 6.53e-01 | 86.8% | 100.0% |
| 5045691 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.76 | 64.0 | 6.65e-01 | 92.1% | 100.0% |
| 5071792 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.76 | 64.0 | 6.51e-01 | 94.7% | 93.3% |
| 4425640 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.75 | 62.0 | 6.46e-01 | 94.7% | 97.1% |
| 3957797 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.75 | 60.0 | 6.40e-01 | 86.8% | 100.0% |
| 4646775 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.75 | 63.0 | 6.35e-01 | 96.1% | 93.3% |
| 4975073 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.75 | 63.0 | 6.57e-01 | 92.1% | 100.0% |
| 3276741 | 7509.1.1.0 ↗ | a/b three-layered sandwiches › NIF3 (NGG1p interacting factor 3)-like › NIF3 (NGG1p interacting factor 3)-like › NIF3 (NGG1p interacting factor 3)-like | 0.75 | 63.0 | 6.39e-01 | 96.1% | 93.3% |
| 4217450 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.75 | 56.0 | 5.79e-01 | 90.8% | 85.7% |
| 3946828 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.75 | 57.0 | 6.11e-01 | 92.1% | 96.9% |
| 3589856 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.75 | 58.0 | 6.23e-01 | 85.5% | 98.5% |
| 4059719 | 304.9.1.61 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Thc1_RRM | 0.75 | 62.0 | 6.32e-01 | 90.8% | 92.0% |
| 3574016 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.74 | 63.0 | 6.48e-01 | 94.7% | 98.6% |
| 5030234 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.74 | 60.0 | 6.24e-01 | 88.2% | 98.6% |
| 4023193 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.74 | 58.0 | 6.22e-01 | 93.4% | 100.0% |
| 4945605 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.74 | 58.0 | 6.21e-01 | 86.8% | 100.0% |
| 4167129 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.74 | 58.0 | 6.20e-01 | 92.1% | 100.0% |
| 5046128 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.74 | 61.0 | 6.17e-01 | 90.8% | 94.7% |
| 5040118 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.73 | 60.0 | 6.26e-01 | 93.4% | 98.6% |
| 5023503 | 304.110.1.0 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like | 0.73 | 61.0 | 6.31e-01 | 100.0% | 98.6% |
| 4043627 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.73 | 60.0 | 6.05e-01 | 88.2% | 90.7% |
| 5044711 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.73 | 63.0 | 6.39e-01 | 96.1% | 100.0% |
| 4959923 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.73 | 58.0 | 6.06e-01 | 86.8% | 100.0% |
| 5051224 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.73 | 60.0 | 6.21e-01 | 89.5% | 100.0% |
| 5027466 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.73 | 57.0 | 6.07e-01 | 92.1% | 100.0% |
| 5039893 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.73 | 56.0 | 5.62e-01 | 92.1% | 84.0% |
| 5052390 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.73 | 56.0 | 5.56e-01 | 93.4% | 80.0% |
| 4174001 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.73 | 54.0 | 5.69e-01 | 92.1% | 92.3% |
| 3938553 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.72 | 61.0 | 5.11e-01 | 93.4% | 93.0% |
| 4971880 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.72 | 61.0 | 4.29e-01 | 94.7% | 42.5% |
| 3719254 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.72 | 60.0 | 4.65e-01 | 92.1% | 44.6% |
| 1956182 | 304.164.1.0 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein NegoA.19184.a C-terminal domain › Hypothetical protein NegoA.19184.a C-terminal domain | 0.72 | 60.0 | 6.20e-01 | 97.4% | 98.6% |
| 5037704 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.72 | 61.0 | 6.16e-01 | 93.4% | 97.3% |
| 3959992 | 304.121.1.0 ↗ | a+b two layers › Alpha-beta plaits › SP0830-like › SP0830-like | 0.72 | 57.0 | 6.03e-01 | 85.5% | 100.0% |
| 1079958 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.72 | 61.0 | 6.20e-01 | 94.7% | 97.3% |
| 5009657 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.72 | 59.0 | 6.10e-01 | 94.7% | 97.1% |
| 5026344 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.72 | 56.0 | 6.01e-01 | 88.2% | 100.0% |
| 5045812 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.71 | 61.0 | 6.08e-01 | 96.1% | 91.3% |
| 3596801 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.71 | 58.0 | 5.78e-01 | 89.5% | 86.3% |
| 4554827 | 304.11.1.1 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Acyl_transf_1 | 0.71 | 57.0 | 5.91e-01 | 93.4% | 95.7% |
| 4976695 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.71 | 60.0 | 5.68e-01 | 93.4% | 82.2% |
| 3726803 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.71 | 63.0 | 5.79e-01 | 98.7% | 77.6% |
| 4472004 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.71 | 52.0 | 5.27e-01 | 89.5% | 78.7% |
| 3989870 | 304.24.1.2 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF1949 | 0.71 | 59.0 | 6.02e-01 | 94.7% | 97.3% |
| 5036839 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.70 | 57.0 | 5.91e-01 | 89.5% | 100.0% |
| 5058294 | 304.24.1.6 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C | 0.70 | 58.0 | 6.02e-01 | 90.8% | 100.0% |
| 4153537 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.70 | 52.0 | 5.17e-01 | 92.1% | 76.2% |
| 4956873 | 2.1.1.374 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF2110_C | 0.70 | 60.0 | 4.57e-01 | 96.1% | 40.6% |
| 5044457 | 304.20.1.0 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0.70 | 60.0 | 4.69e-01 | 94.7% | 90.0% |
| 4965231 | 304.24.1.2 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF1949 | 0.70 | 55.0 | 5.66e-01 | 86.8% | 94.3% |
| 3700944 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.70 | 58.0 | 5.70e-01 | 93.4% | 86.7% |
| 3915495 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.69 | 57.0 | 5.93e-01 | 93.4% | 100.0% |
| 5301 | 304.24.1.2 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF1949 | 0.69 | 55.0 | 5.74e-01 | 86.8% | 100.0% |
| 5045569 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.69 | 54.0 | 5.32e-01 | 93.4% | 81.2% |
| 3723051 | 304.3.1.10 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA_PCA1 | 0.69 | 53.0 | 5.49e-01 | 89.5% | 90.0% |
| 3781133 | 304.24.1.7 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › V_ATPase_I | 0.69 | 61.0 | 6.02e-01 | 100.0% | 97.5% |
| 5053078 | 304.20.1.4 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C | 0.69 | 59.0 | 4.52e-01 | 96.1% | 81.7% |
| 3674181 | 304.8.1.7 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ALS_ss_C | 0.68 | 56.0 | 5.17e-01 | 100.0% | 70.0% |
| 3404332 | 304.7.1.1 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Propep_M14 | 0.68 | 56.0 | 5.34e-01 | 97.4% | 78.9% |
| 4946891 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.68 | 55.0 | 5.71e-01 | 90.8% | 100.0% |
| 4556494 | 304.56.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 | 0.67 | 55.0 | 5.24e-01 | 97.4% | 75.3% |
| 3350779 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.67 | 59.0 | 5.82e-01 | 100.0% | 98.8% |
| 3895104 | 304.24.1.7 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › V_ATPase_I | 0.67 | 59.0 | 5.20e-01 | 100.0% | 89.6% |
| 3954020 | 304.56.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 | 0.67 | 57.0 | 5.37e-01 | 94.7% | 77.4% |
| 3387917 | 304.8.1.7 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ALS_ss_C | 0.67 | 55.0 | 5.66e-01 | 98.7% | 100.0% |
| 3308472 | 304.9.1.102 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_NFXL1 | 0.67 | 54.0 | 5.32e-01 | 96.1% | 83.7% |
| 4984075 | 304.5.1.30 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › AsnC_trans_reg | 0.67 | 57.0 | 5.79e-01 | 97.4% | 100.0% |
| 3864058 | 4323.1.1.1 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.67 | 58.0 | 5.13e-01 | 100.0% | 89.6% |
| 4215974 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.67 | 52.0 | 5.33e-01 | 92.1% | 92.9% |
| 5011764 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.66 | 53.0 | 5.26e-01 | 94.7% | 85.0% |
| 3974087 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.66 | 57.0 | 3.46e-01 | 98.7% | 35.6% |
| 3555679 | 304.126.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.65 | 57.0 | 5.32e-01 | 100.0% | 83.2% |
| 3775881 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.65 | 57.0 | 5.61e-01 | 100.0% | 97.5% |
| 3225952 | 304.5.1.23 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › V_ATPase_I | 0.65 | 56.0 | 5.30e-01 | 100.0% | 82.1% |
| 4965616 | 304.24.1.39 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF790 | 0.65 | 57.0 | 4.84e-01 | 98.7% | 63.2% |
| 3164638 | 2006.1.1.37 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 | 0.65 | 50.0 | 3.51e-01 | 85.5% | 51.9% |
| 5015916 | 2002.1.1.459 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF26257 | 0.64 | 53.0 | 3.46e-01 | 93.4% | 21.1% |
| 4965339 | 304.8.1.7 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ALS_ss_C | 0.64 | 53.0 | 5.25e-01 | 100.0% | 91.3% |
| 3732593 | 4340.1.1.1 ↗ | a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb5 | 0.63 | 43.0 | 4.57e-01 | 77.6% | 83.1% |
| 4954773 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.61 | 49.0 | 4.26e-01 | 92.1% | 57.4% |
| 5008116 | 304.24.1.39 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › DUF790 | 0.61 | 53.0 | 4.98e-01 | 98.7% | 84.2% |
| 5044202 | 304.164.1.0 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein NegoA.19184.a C-terminal domain › Hypothetical protein NegoA.19184.a C-terminal domain | 0.61 | 48.0 | 5.01e-01 | 98.7% | 98.6% |
| 2320836 | 4340.1.1.1 ↗ | a+b complex topology › TFB5-related › TFB5-related › TFB5-related › Tfb5 | 0.60 | 42.0 | 4.39e-01 | 75.0% | 86.4% |
D3
high
residues 406-474
D4
medium
residues 215-308
Domain cluster:
rep: term4_saliva_scaffold_1_prodigal-single.1__X__X__00076__D211-290
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k0nA00 | 1.10.246.20 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain | 0.64 | 45.0 | 4.69e-01 | 92.6% | 80.0% |
| 3t6gB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.62 | 44.0 | 3.85e-01 | 72.3% | 78.4% |
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.62 | 47.0 | 4.02e-01 | 80.9% | 87.6% |
| 1hwyA03 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 53.0 | 3.78e-01 | 98.9% | 87.8% |
| 1kqfC00 | 1.20.950.20 | Mainly Alpha › Up-down Bundle › Fumarate Reductase Cytochrome B subunit › Transmembrane di-heme cytochromes, Chain C | 0.56 | 40.0 | 3.04e-01 | 73.4% | 77.3% |
| 1hs7A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 37.0 | 3.69e-01 | 74.5% | 64.9% |
| 2oduA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 38.0 | 3.71e-01 | 70.2% | 67.6% |
| 1zhcA00 | 6.10.280.50 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 38.0 | 4.09e-01 | 71.3% | 98.7% |
| 1owaA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 37.0 | 3.62e-01 | 71.3% | 69.8% |
| 3rbtA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.53 | 33.0 | 3.09e-01 | 72.3% | 49.6% |
| 5u56A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 35.0 | 3.38e-01 | 70.2% | 58.9% |
| 4kjmA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.52 | 31.0 | 3.68e-01 | 94.7% | 98.2% |
| 2fh5A01 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 42.0 | 3.89e-01 | 89.4% | 89.3% |
| 1wkbA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.51 | 39.0 | 3.64e-01 | 83.0% | 71.9% |
| 3nvoB02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.51 | 36.0 | 3.41e-01 | 74.5% | 69.0% |
| 4gf0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.50 | 34.0 | 3.29e-01 | 70.2% | 60.2% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 36.0 | 2.75e-01 | 76.6% | 74.2% |
| 8b6jF01 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.50 | 33.0 | 3.74e-01 | 71.3% | 95.5% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3615903 | 5054.1.1.85 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Acyl_transf_3 | 0.67 | 49.0 | 3.15e-01 | 76.6% | 17.3% |
| 3358694 | 192.29.1.101 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Rx_N | 0.60 | 42.0 | 3.87e-01 | 74.5% | 55.8% |
| 3940867 | 632.22.1.67 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › DUF842 | 0.60 | 46.0 | 4.60e-01 | 80.9% | 86.3% |
| 3242033 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.59 | 36.0 | 3.52e-01 | 80.9% | 56.0% |
| 4492294 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.57 | 44.0 | 3.25e-01 | 88.3% | 30.6% |
| 4105867 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.57 | 43.0 | 3.16e-01 | 81.9% | 30.0% |
| 4444459 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.56 | 43.0 | 3.12e-01 | 80.9% | 28.6% |
| 4522145 | 5050.1.1.54 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Mntp | 0.56 | 44.0 | 3.60e-01 | 86.2% | 58.3% |
| 3585432 | 604.1.1.98 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_Anc-1 | 0.55 | 37.0 | 3.54e-01 | 70.2% | 60.0% |
| 4242465 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.55 | 42.0 | 4.27e-01 | 84.0% | 83.2% |
| 3237761 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.54 | 36.0 | 3.60e-01 | 71.3% | 65.0% |
| 3643155 | 603.1.1.2 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Not3 | 0.54 | 37.0 | 3.39e-01 | 70.2% | 65.8% |
| 5020872 | 1079.1.1.1 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › DsbD | 0.54 | 43.0 | 3.34e-01 | 86.2% | 78.0% |
| 3962991 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.53 | 37.0 | 2.94e-01 | 73.4% | 88.7% |
| 3238851 | 3812.1.1.0 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE | 0.53 | 37.0 | 3.58e-01 | 72.3% | 95.2% |
| 3444544 | 3615.1.1.0 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain | 0.52 | 37.0 | 3.17e-01 | 73.4% | 72.9% |
| 3978264 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.52 | 40.0 | 3.46e-01 | 81.9% | 64.7% |
| 4118542 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.52 | 42.0 | 3.07e-01 | 88.3% | 31.9% |
| 3839004 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.52 | 36.0 | 3.66e-01 | 87.2% | 74.4% |
| 3579522 | 604.1.1.98 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_Anc-1 | 0.52 | 36.0 | 3.50e-01 | 72.3% | 66.7% |
| 4523639 | 5086.1.1.92 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_AprE | 0.51 | 40.0 | 3.21e-01 | 85.1% | 77.4% |
| 3999487 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 36.0 | 3.33e-01 | 74.5% | 76.8% |
| 5078867 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.50 | 33.0 | 3.42e-01 | 70.2% | 71.1% |
D5
medium
residues 309-377
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qenA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 53.0 | 5.37e-01 | 89.9% | 70.0% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 54.0 | 4.76e-01 | 92.8% | 50.5% |
| 3dpuA03 | 1.10.10.2200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.71 | 52.0 | 5.08e-01 | 91.3% | 72.0% |
| 1jogA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.65 | 54.0 | 4.39e-01 | 95.7% | 48.1% |
| 1imvA02 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.63 | 52.0 | 3.79e-01 | 92.8% | 41.7% |
| 2bl0B01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.63 | 40.0 | 4.08e-01 | 71.0% | 66.2% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.63 | 47.0 | 4.10e-01 | 79.7% | 99.0% |
| 1jmoA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.62 | 50.0 | 3.58e-01 | 92.8% | 42.3% |
| 3dptB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 44.0 | 4.44e-01 | 89.9% | 75.4% |
| 1v4aA03 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.61 | 51.0 | 4.08e-01 | 100.0% | 43.8% |
| 2do7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 44.0 | 4.26e-01 | 92.8% | 68.8% |
| 1e7uA05 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.60 | 49.0 | 3.62e-01 | 91.3% | 82.2% |
| 4ixjA02 | 3.30.1690.20 | Alpha Beta › 2-Layer Sandwich › TcpA-like pilin › | 0.60 | 51.0 | 4.04e-01 | 97.1% | 93.9% |
| 3a1sA02 | 1.10.287.1770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 49.0 | 4.58e-01 | 94.2% | 87.5% |
| 4ihuA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.59 | 50.0 | 3.72e-01 | 100.0% | 76.6% |
| 2nsfA01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.58 | 42.0 | 3.17e-01 | 75.4% | 72.3% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 39.0 | 4.20e-01 | 100.0% | 81.7% |
| 1b06A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.57 | 43.0 | 4.43e-01 | 95.7% | 83.6% |
| 3umgA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 40.0 | 4.07e-01 | 81.2% | 93.0% |
| 4ye6A02 | 1.10.10.2420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.55 | 41.0 | 4.38e-01 | 88.4% | 98.3% |
| 2hoqA02 | 1.10.150.520 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.55 | 46.0 | 4.52e-01 | 100.0% | 87.3% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 46.0 | 3.88e-01 | 95.7% | 66.7% |
| 2uyyA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.54 | 47.0 | 3.96e-01 | 100.0% | 69.9% |
| 2i7uA00 | 6.10.250.1010 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.54 | 38.0 | 4.01e-01 | 81.2% | 83.9% |
| 1zgdA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.53 | 41.0 | 2.70e-01 | 84.1% | 28.6% |
| 2nyvA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 41.0 | 4.25e-01 | 92.8% | 92.2% |
| 3u4qB03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 38.0 | 2.69e-01 | 78.3% | 68.3% |
| 1o3uA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.52 | 39.0 | 3.37e-01 | 87.0% | 49.2% |
| 2w02B01 | 1.10.150.640 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle | 0.51 | 40.0 | 3.98e-01 | 88.4% | 83.8% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3653189 | 101.1.2.10 ↗ | alpha arrays › HTH › HTH › winged helix domain › Linker_histone | 0.76 | 56.0 | 5.79e-01 | 85.5% | 83.1% |
| 4955345 | 101.1.2.181 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM_C | 0.76 | 55.0 | 5.30e-01 | 94.2% | 67.5% |
| 2409292 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.73 | 53.0 | 4.58e-01 | 91.3% | 50.0% |
| 3585425 | 101.1.2.98 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1 | 0.72 | 59.0 | 5.32e-01 | 94.2% | 65.3% |
| 3174373 | 101.1.2.780 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF31199 | 0.69 | 50.0 | 4.95e-01 | 92.8% | 72.0% |
| 3274011 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 53.0 | 5.50e-01 | 92.8% | 89.2% |
| 3249893 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 52.0 | 4.83e-01 | 91.3% | 63.3% |
| 4955367 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 53.0 | 5.37e-01 | 94.2% | 85.7% |
| 3792105 | 101.7.1.1 ↗ | alpha arrays › HTH › DEK-C › DEK-C › DEK_C | 0.67 | 47.0 | 4.97e-01 | 85.5% | 83.3% |
| 3687407 | 101.11.1.0 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0.62 | 48.0 | 4.86e-01 | 91.3% | 84.3% |
| 3592370 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.62 | 41.0 | 3.38e-01 | 84.1% | 38.3% |
| 4942208 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.61 | 40.0 | 4.01e-01 | 94.2% | 65.7% |
| 3585015 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 48.0 | 4.36e-01 | 91.3% | 63.2% |
| 4961908 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.60 | 47.0 | 4.52e-01 | 85.5% | 86.3% |
| 3363913 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 50.0 | 4.50e-01 | 98.6% | 96.0% |
| 5074223 | 622.5.1.0 ↗ | alpha bundles › YvfG-like › Probable 26S proteasome regulatory subunit p27 › Probable 26S proteasome regulatory subunit p27 | 0.58 | 49.0 | 4.50e-01 | 91.3% | 76.7% |
| 3285527 | 102.1.1.157 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › OHCU_decarbox | 0.57 | 40.0 | 3.62e-01 | 88.4% | 53.7% |
| 3441050 | 101.1.1.295 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_70 | 0.56 | 47.0 | 4.83e-01 | 92.8% | 96.9% |
| 3303852 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 48.0 | 4.58e-01 | 98.6% | 88.2% |
| 3609849 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.56 | 48.0 | 4.32e-01 | 100.0% | 100.0% |
| 3687243 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 47.0 | 4.77e-01 | 97.1% | 100.0% |
| 2075033 | 3787.1.1.0 ↗ | alpha bundles › HAD superfamily helical bundle insertion domain | 0.55 | 47.0 | 4.51e-01 | 95.7% | 97.5% |
| 3896554 | 101.1.1.132 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SENP3_5_N | 0.55 | 45.0 | 4.51e-01 | 95.7% | 90.0% |
| 3472197 | 109.4.1.1341 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COG3_N, COG3_C | 0.54 | 44.0 | 2.86e-01 | 89.9% | 21.3% |
| 4998572 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 45.0 | 4.30e-01 | 98.6% | 88.2% |
| 3553833 | 5086.1.1.102 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PTHB1_hp | 0.53 | 47.0 | 3.44e-01 | 100.0% | 70.0% |
| 2814626 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.53 | 39.0 | 2.52e-01 | 81.2% | 17.7% |
| 3963880 | 191.1.1.9 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR | 0.52 | 39.0 | 3.14e-01 | 82.6% | 66.9% |
| 4000037 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.52 | 40.0 | 4.31e-01 | 87.0% | 95.0% |
| 4003573 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.52 | 38.0 | 2.80e-01 | 84.1% | 31.2% |
| 4027821 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.51 | 39.0 | 4.01e-01 | 87.0% | 89.2% |
| 3875142 | 601.11.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain › Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain › Perilipin | 0.50 | 46.0 | 3.15e-01 | 100.0% | 30.9% |
| 4408647 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.50 | 42.0 | 3.61e-01 | 89.9% | 86.7% |
| 3456226 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.50 | 45.0 | 3.02e-01 | 100.0% | 30.0% |