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SRR1747052_scaffold_1_prodigal-single.1__X__X__00211
Bact-VirSRR1747052_scaffold_1_prodigal-single.1__X__X__00211
Identity
- Kingdom:
- phage
Quality
78.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-44
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 60.0 | 4.82e-01 | 90.2% | 44.9% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.76 | 65.0 | 6.11e-01 | 100.0% | 90.4% |
| 2kcwA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.76 | 59.0 | 4.14e-01 | 100.0% | 25.9% |
| 7kfuC02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.76 | 64.0 | 3.95e-01 | 100.0% | 17.2% |
| 1bgfA00 | 1.10.532.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain | 0.75 | 66.0 | 4.66e-01 | 100.0% | 39.5% |
| 2gsvA00 | 6.10.140.40 | Special › Helix non-globular › Helix Hairpins › | 0.72 | 61.0 | 5.29e-01 | 100.0% | 62.7% |
| 4u1cA01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.69 | 59.0 | 5.48e-01 | 97.6% | 90.4% |
| 3qqaA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 56.0 | 4.92e-01 | 95.1% | 78.0% |
| 3b8mC01 | 3.30.1890.10 | Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like | 0.65 | 55.0 | 3.77e-01 | 97.6% | 71.5% |
| 3m1cB01 | 3.30.390.170 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.63 | 52.0 | 3.95e-01 | 97.6% | 50.5% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3859178 | 6158.1.1.0 ↗ | alpha bundles › Nucleoporin p58/p45 helical region › Nucleoporin p58/p45 helical region › Nucleoporin p58/p45 helical region | 0.92 | 82.0 | 6.82e-01 | 100.0% | 58.6% |
| 3568854 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.70 | 59.0 | 4.96e-01 | 100.0% | 93.3% |
| 5049973 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.66 | 52.0 | 3.69e-01 | 95.1% | 35.0% |
| 3437546 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.60 | 53.0 | 4.26e-01 | 100.0% | 95.0% |
| 4542817 | 3757.1.1.0 ↗ | extended segments › AF1503 pre-HAMP domain › AF1503 pre-HAMP domain › AF1503 pre-HAMP domain | 0.58 | 44.0 | 4.40e-01 | 100.0% | 93.3% |