←Back to structures
SRR1747052_scaffold_1_prodigal-single.1__X__X__00384
Bact-VirSRR1747052_scaffold_1_prodigal-single.1__X__X__00384
Identity
- Kingdom:
- phage
Quality
79.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 32-181
Domain cluster:
rep: aot2015-SM37_SRR1761715_Peru_trim_clean_trim_clean_scaffold_2_curated_closed_complete_prodigal-single.1__X__X__00244__D863-969
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yu0A02 | 2.80.20.10 | Mainly Beta › Trefoil › Tail fiber receptor-binding protein › Tail fiber receptor-binding protein | 0.52 | 46.0 | 4.67e-01 | 99.3% | 96.6% |
| 3muuB02 | 2.60.40.2400 | Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain C | 0.52 | 26.0 | 3.56e-01 | 87.3% | 97.3% |
| 3sd2A01 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 27.0 | 3.67e-01 | 82.7% | 100.0% |
D2
high
residues 182-296
Domain cluster:
rep: aot2015-SM37_SRR1761715_Peru_trim_clean_trim_clean_scaffold_2_curated_closed_complete_prodigal-single.1__X__X__00244__D863-969
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3813762 | 4.25.1.2 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD | 0.55 | 29.0 | 3.55e-01 | 89.6% | 86.2% |
| 3415779 | 913.1.1.0 ↗ | few secondary structure elements › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) | 0.52 | 28.0 | 3.33e-01 | 100.0% | 78.6% |
D3
high
residues 326-413
Domain cluster:
rep: NC_022915.1__YP_008853790.1__X532_gp05__00005__D164-234
D4
medium
residues 1-30_297-323