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SRR1747052_scaffold_1_prodigal-single.1__X__X__00384

Bact-Vir

SRR1747052_scaffold_1_prodigal-single.1__X__X__00384

Identity

Kingdom:
phage

Quality

79.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 32-181
PDB
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yu0A02 2.80.20.10 Mainly Beta › Trefoil › Tail fiber receptor-binding protein › Tail fiber receptor-binding protein 0.52 46.0 4.67e-01 99.3% 96.6%
3muuB02 2.60.40.2400 Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain C 0.52 26.0 3.56e-01 87.3% 97.3%
3sd2A01 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 27.0 3.67e-01 82.7% 100.0%
D2 high residues 182-296
PDB
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3813762 4.25.1.2 beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD 0.55 29.0 3.55e-01 89.6% 86.2%
3415779 913.1.1.0 few secondary structure elements › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) 0.52 28.0 3.33e-01 100.0% 78.6%
D3 high residues 326-413
PDB
D4 medium residues 1-30_297-323
PDB