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SRR1747052_scaffold_2_prodigal-single.1__X__X__00016
Bact-VirSRR1747052_scaffold_2_prodigal-single.1__X__X__00016
Identity
- Kingdom:
- phage
Quality
91.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-72
Domain cluster:
rep: MT740307.1__QNR53851.1__phiK7A1_063__00061__D140-222
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nppA00 | 2.40.50.480 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 | 0.63 | 45.0 | 4.27e-01 | 76.1% | 81.6% |
| 4dzgA00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 47.0 | 4.12e-01 | 81.7% | 98.2% |
| 2wsuA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 51.0 | 4.18e-01 | 100.0% | 74.8% |
| 1wibA00 | 3.30.1550.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain | 0.58 | 42.0 | 3.89e-01 | 77.5% | 77.2% |
| 6voxA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.58 | 47.0 | 4.07e-01 | 91.5% | 85.7% |
| 3mxnB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 47.0 | 3.89e-01 | 100.0% | 76.3% |
| 2nncA00 | 2.60.40.2470 | Mainly Beta › Sandwich › Immunoglobulin-like › SoxY domain | 0.53 | 39.0 | 3.48e-01 | 83.1% | 56.4% |
| 3i6sA04 | 2.60.40.2310 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 45.0 | 3.92e-01 | 97.2% | 75.5% |
| 2x5rA01 | 3.30.470.40 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › | 0.52 | 40.0 | 3.59e-01 | 90.1% | 79.1% |
| 1uxbA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.50 | 39.0 | 3.09e-01 | 91.5% | 94.6% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3287728 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.64 | 43.0 | 3.96e-01 | 70.4% | 75.8% |
| 3702156 | 11.1.1.385 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ASH | 0.55 | 45.0 | 4.05e-01 | 91.5% | 81.0% |
| 3596285 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 40.0 | 3.02e-01 | 76.1% | 70.6% |
| 3480363 | 11.1.1.880 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26187 | 0.55 | 40.0 | 3.66e-01 | 80.3% | 66.0% |
| 3607974 | 11.1.1.360 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › HYDIN_VesB_CFA65-like_Ig | 0.54 | 44.0 | 3.99e-01 | 94.4% | 79.0% |
| 3733419 | 2008.1.1.79 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Pet127 | 0.52 | 43.0 | 2.77e-01 | 97.2% | 69.1% |