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SRR1747052_scaffold_2_prodigal-single.1__X__X__00059
Bact-VirSRR1747052_scaffold_2_prodigal-single.1__X__X__00059
Identity
- Kingdom:
- phage
Quality
95.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-72
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nn4A00 | 1.10.287.760 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like | 0.70 | 45.0 | 4.28e-01 | 86.5% | 56.5% |
| 3pfyA02 | 6.10.20.180 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › | 0.70 | 41.0 | 4.01e-01 | 92.3% | 54.4% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.64 | 45.0 | 3.90e-01 | 75.0% | 95.2% |
| 6p73A02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.61 | 50.0 | 3.79e-01 | 100.0% | 60.8% |
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 40.0 | 3.91e-01 | 71.2% | 64.9% |
| 1okcA00 | 1.50.40.10 | Mainly Alpha › Alpha/alpha barrel › Mitochondrial carrier fold › Mitochondrial carrier domain | 0.57 | 39.0 | 2.45e-01 | 71.2% | 12.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4991351 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.63 | 50.0 | 4.39e-01 | 88.5% | 91.3% |
| 3459209 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.61 | 50.0 | 4.84e-01 | 94.2% | 90.0% |
| 3447846 | 5010.1.1.6 ↗ | extended segments › Bacterial aa3 type cytochrome c oxidase subunit IV › Bacterial aa3 type cytochrome c oxidase subunit IV › Bacterial aa3 type cytochrome c oxidase subunit IV › SPC12 | 0.54 | 37.0 | 3.91e-01 | 73.1% | 79.2% |
| 3954523 | 3932.1.1.2 ↗ | alpha bundles › CRISPR/Cas system-associated protein Csm6 6H domain › CRISPR/Cas system-associated protein Csm6 6H domain › CRISPR/Cas system-associated protein Csm6 6H domain › Cas_Csm6_6H | 0.52 | 34.0 | 2.95e-01 | 86.5% | 43.8% |