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SRR1747052_scaffold_2_prodigal-single.1__X__X__00078

Bact-Vir

SRR1747052_scaffold_2_prodigal-single.1__X__X__00078

Identity

Kingdom:
phage

Quality

70.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 49-164
PDB
Domain cluster: rep: js4906-29-5_S40_scaffold_13_prodigal-single.1__X__X__00046__D3-97
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wfxA02 3.20.170.30 Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › 0.77 56.0 6.27e-01 89.7% 95.6%
2o0pA00 3.20.170.20 Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › Protein of unknown function DUF952 0.72 57.0 5.76e-01 91.4% 84.2%
4eyyQ02 3.20.170.50 Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › Dot/Icm secretion system IcmQ, C-terminal domain 0.64 50.0 5.13e-01 90.5% 85.1%
1gs0A02 3.90.228.10 Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › 0.64 58.0 4.68e-01 98.3% 71.6%
4gv2A02 3.90.228.10 Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › 0.63 56.0 4.54e-01 95.7% 72.9%
2x5yA00 3.90.228.10 Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › 0.60 54.0 4.66e-01 94.8% 65.5%
5lhrA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 32.0 3.29e-01 91.4% 55.6%
2z9iC01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 30.0 3.34e-01 99.1% 70.7%
3nziA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 32.0 3.31e-01 100.0% 66.0%
6fezA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 28.0 3.07e-01 91.4% 63.8%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4296568 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.80 62.0 6.78e-01 100.0% 96.8%
4303698 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.79 60.0 6.66e-01 100.0% 97.9%
4008473 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.79 59.0 6.39e-01 98.3% 90.9%
5008044 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.79 61.0 6.69e-01 100.0% 97.9%
4125268 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.79 59.0 6.67e-01 99.1% 100.0%
4622968 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.79 59.0 6.64e-01 99.1% 100.0%
5061730 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.79 59.0 6.63e-01 97.4% 100.0%
4546240 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.78 59.0 6.60e-01 98.3% 100.0%
3106804 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.78 61.0 6.44e-01 100.0% 91.3%
5060086 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.78 60.0 6.65e-01 100.0% 98.9%
4994805 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.77 60.0 6.37e-01 100.0% 91.3%
4679144 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.77 60.0 6.54e-01 100.0% 97.9%
3953513 237.1.1.9 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › DUF952 0.76 62.0 6.29e-01 95.7% 87.0%
5077692 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.75 61.0 6.42e-01 100.0% 94.3%
4013919 237.1.1.9 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › DUF952 0.73 58.0 5.96e-01 92.2% 87.3%
7450 237.1.1.9 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › DUF952 0.72 57.0 5.79e-01 92.2% 85.0%
3360549 237.1.1.4 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PTS_2-RNA 0.68 59.0 6.08e-01 100.0% 98.2%
3344114 237.1.1.9 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › DUF952 0.68 57.0 5.72e-01 92.2% 87.5%
3256269 237.1.1.0 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation 0.68 55.0 5.80e-01 94.8% 95.2%
3905755 237.1.1.0 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation 0.64 56.0 5.43e-01 94.8% 98.5%
4482243 237.1.1.11 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › RES 0.63 53.0 4.82e-01 90.5% 92.9%
3555152 237.1.1.1 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP 0.63 55.0 4.69e-01 94.8% 67.6%
3196342 237.1.1.1 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP 0.61 52.0 4.47e-01 94.8% 59.8%
4498412 237.1.1.0 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation 0.57 49.0 4.53e-01 94.8% 73.3%
3455165 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.54 24.0 2.67e-01 100.0% 46.3%
3962585 4052.1.1.0 ↗ beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like 0.53 32.0 3.57e-01 99.1% 76.7%