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SRR1747052_scaffold_2_prodigal-single.1__X__X__00137
Bact-VirSRR1747052_scaffold_2_prodigal-single.1__X__X__00137
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 44-176
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01464.26 best | SLT | 34.5 | 1.90e-08 | 81.2% | 79.5% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hjzA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.79 | 67.0 | 5.89e-01 | 88.0% | 87.4% |
| 6cfcA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.77 | 67.0 | 6.22e-01 | 91.7% | 91.3% |
| 1qsaA03 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.76 | 67.0 | 6.05e-01 | 92.5% | 85.0% |
| 4c5fA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.75 | 65.0 | 5.95e-01 | 91.0% | 96.4% |
| 4yibA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.75 | 65.0 | 6.09e-01 | 91.7% | 88.0% |
| 1xsfA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.73 | 46.0 | 5.09e-01 | 86.5% | 77.8% |
| 3bkhA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.72 | 61.0 | 5.40e-01 | 88.7% | 91.2% |
| 2xqoA00 | 1.10.530.60 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.71 | 62.0 | 5.27e-01 | 93.2% | 74.3% |
| 1ichA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.62 | 40.0 | 4.71e-01 | 75.2% | 100.0% |
| 2o36A01 | 1.20.1050.40 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › Endopeptidase. Chain P; domain 1 | 0.57 | 28.0 | 2.87e-01 | 95.5% | 46.1% |
| 1i6zA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.54 | 29.0 | 2.94e-01 | 96.2% | 50.4% |
| 5c5sB00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.52 | 30.0 | 2.66e-01 | 74.4% | 35.1% |
| 2vzcB00 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.52 | 36.0 | 3.73e-01 | 71.4% | 97.6% |
| 6xpdA01 | 1.20.1510.10 | Mainly Alpha › Up-down Bundle › Alpha-lytic protease prodomain-like › Cation efflux protein transmembrane domain | 0.51 | 33.0 | 2.87e-01 | 100.0% | 42.6% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3254511 | 235.1.1.1 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys | 0.81 | 55.0 | 6.15e-01 | 88.0% | 87.6% |
| 4995668 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.79 | 58.0 | 6.07e-01 | 75.9% | 97.6% |
| 4530587 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.79 | 66.0 | 5.77e-01 | 86.5% | 85.4% |
| 3166094 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.78 | 66.0 | 5.98e-01 | 89.5% | 92.6% |
| 3947473 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.77 | 69.0 | 6.60e-01 | 94.7% | 95.3% |
| 4031083 | 235.1.1.14 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transglycosylas | 0.77 | 46.0 | 5.83e-01 | 78.9% | 98.8% |
| 2393514 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.77 | 69.0 | 6.01e-01 | 94.0% | 86.8% |
| 4258903 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.76 | 59.0 | 5.49e-01 | 81.2% | 89.1% |
| 185214 | 235.1.1.14 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transglycosylas | 0.75 | 46.0 | 5.55e-01 | 85.7% | 92.0% |
| 4515466 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.75 | 67.0 | 5.95e-01 | 93.2% | 91.1% |
| 3941811 | 235.1.1.32 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 | 0.75 | 66.0 | 6.04e-01 | 92.5% | 86.5% |
| 3839661 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.75 | 65.0 | 5.97e-01 | 91.7% | 86.5% |
| 5028353 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.75 | 66.0 | 5.93e-01 | 93.2% | 88.9% |
| 3945171 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.74 | 59.0 | 5.75e-01 | 82.7% | 83.4% |
| 3965879 | 235.1.1.32 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 | 0.74 | 64.0 | 5.95e-01 | 91.7% | 84.8% |
| 3979308 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.74 | 64.0 | 5.81e-01 | 91.7% | 91.4% |
| 3964630 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.74 | 64.0 | 5.90e-01 | 91.0% | 89.6% |
| 3385979 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.74 | 63.0 | 5.49e-01 | 89.5% | 72.1% |
| 3978377 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.73 | 68.0 | 5.89e-01 | 98.5% | 87.2% |
| 3969917 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.73 | 63.0 | 5.44e-01 | 91.0% | 99.5% |
| 4164050 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.73 | 69.0 | 5.84e-01 | 100.0% | 83.9% |
| 1175858 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.72 | 61.0 | 5.32e-01 | 88.7% | 87.8% |
| 3971115 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.72 | 62.0 | 5.68e-01 | 91.0% | 88.8% |
| 3944103 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.71 | 65.0 | 5.82e-01 | 97.0% | 88.3% |
| 4321901 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.71 | 61.0 | 5.42e-01 | 91.0% | 86.5% |
| 3389460 | 235.1.1.12 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Destabilase | 0.70 | 64.0 | 6.39e-01 | 97.0% | 100.0% |
| 3582448 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.63 | 51.0 | 5.24e-01 | 84.2% | 86.2% |
| 3226948 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 33.0 | 3.71e-01 | 85.7% | 80.0% |
| 4940993 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.51 | 40.0 | 3.00e-01 | 82.7% | 94.2% |
| 3409093 | 4156.1.1.4 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C | 0.50 | 36.0 | 3.53e-01 | 90.2% | 68.3% |