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SRR1747052_scaffold_2_prodigal-single.1__X__X__00171
Bact-VirSRR1747052_scaffold_2_prodigal-single.1__X__X__00171
Identity
- Kingdom:
- phage
Quality
74.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-147
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4n0rA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 37.0 | 4.13e-01 | 78.3% | 68.2% |
| 1eq6A00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.65 | 52.0 | 4.28e-01 | 84.9% | 67.2% |
| 3q8pB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.64 | 51.0 | 5.12e-01 | 84.9% | 99.1% |
| 4icwA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.62 | 39.0 | 3.69e-01 | 78.3% | 51.5% |
| 2e3vA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 44.0 | 4.54e-01 | 84.9% | 77.7% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.60 | 35.0 | 4.21e-01 | 77.4% | 90.9% |
| 3r8qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 40.0 | 4.34e-01 | 84.0% | 81.1% |
| 1y6kR01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 43.0 | 4.37e-01 | 84.9% | 77.5% |
| 3wcyA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 40.0 | 4.33e-01 | 84.9% | 83.7% |
| 2dleA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 39.0 | 4.27e-01 | 83.0% | 82.6% |
| 4ca1B02 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.58 | 45.0 | 4.23e-01 | 83.0% | 90.2% |
| 1zyoA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 37.0 | 3.85e-01 | 100.0% | 68.3% |
| 1n26A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 45.0 | 4.58e-01 | 88.7% | 84.1% |
| 2ed8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 35.0 | 3.90e-01 | 81.1% | 76.7% |
| 1jz7A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 44.0 | 4.34e-01 | 83.0% | 84.3% |
| 5mj3A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 37.0 | 4.09e-01 | 82.1% | 82.8% |
| 7sf2A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 39.0 | 4.19e-01 | 80.2% | 82.8% |
| 5j11C02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 35.0 | 3.69e-01 | 83.0% | 68.4% |
| 7y8sB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 36.0 | 3.92e-01 | 83.0% | 80.5% |
| 7uwjC02 | 2.60.40.2150 | Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 | 0.55 | 39.0 | 4.08e-01 | 83.0% | 80.4% |
| 2l03A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.55 | 31.0 | 3.76e-01 | 100.0% | 82.4% |
| 1iarB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.94e-01 | 82.1% | 81.2% |
| 1xdpA02 | 3.30.1840.10 | Alpha Beta › 2-Layer Sandwich › polyphosphate kinase like › Polyphosphate kinase middle domain | 0.53 | 47.0 | 3.84e-01 | 100.0% | 81.7% |
| 2xrnA02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.53 | 41.0 | 3.50e-01 | 84.0% | 81.9% |
| 2ypjA00 | 2.60.120.1070 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 39.0 | 3.74e-01 | 86.8% | 70.5% |
| 1wkbA02 | 3.90.740.10 | Alpha Beta › Alpha-Beta Complex › Isoleucyl-tRNA Synthetase; domain 2 › Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain | 0.51 | 39.0 | 3.16e-01 | 84.0% | 91.6% |
| 3im1A03 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.51 | 39.0 | 3.83e-01 | 82.1% | 86.1% |
| 6mv2A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.50 | 38.0 | 3.87e-01 | 81.1% | 99.0% |
| 1hw5A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 34.0 | 3.27e-01 | 70.8% | 86.8% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3518393 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.63 | 41.0 | 3.71e-01 | 78.3% | 47.3% |
| 5060090 | 2003.1.2.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Thi4 | 0.61 | 55.0 | 3.63e-01 | 98.1% | 55.7% |
| 4003814 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.59 | 48.0 | 4.42e-01 | 100.0% | 66.4% |
| 3583164 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 40.0 | 4.19e-01 | 84.0% | 78.9% |
| 3871240 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 40.0 | 4.13e-01 | 84.9% | 75.0% |
| 5065367 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 46.0 | 4.29e-01 | 86.8% | 81.5% |
| 4327600 | 382.1.1.2 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_TOLIP | 0.56 | 32.0 | 3.57e-01 | 100.0% | 71.8% |
| 4501238 | 207.1.1.37 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › C-JID | 0.55 | 50.0 | 3.84e-01 | 100.0% | 56.7% |
| 4340143 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.54 | 30.0 | 3.68e-01 | 100.0% | 85.5% |
| 4054504 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.53 | 33.0 | 3.57e-01 | 100.0% | 73.3% |
| 3775328 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.53 | 36.0 | 3.63e-01 | 100.0% | 67.3% |
| 3583600 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.53 | 33.0 | 3.73e-01 | 100.0% | 82.5% |
| 3746574 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.53 | 36.0 | 3.77e-01 | 100.0% | 74.0% |
| 3188670 | 288.1.1.0 ↗ | a+b four layers › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases | 0.53 | 47.0 | 4.07e-01 | 100.0% | 73.5% |
| 5055397 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 39.0 | 3.98e-01 | 83.0% | 81.0% |
| 3216452 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.52 | 35.0 | 3.84e-01 | 100.0% | 83.3% |
| 5025179 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.51 | 39.0 | 3.85e-01 | 100.0% | 74.8% |
| 3532718 | 11.1.1.617 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TMEM132_2nd | 0.51 | 41.0 | 3.83e-01 | 85.8% | 73.1% |
| 3689727 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.51 | 38.0 | 2.63e-01 | 80.2% | 64.4% |
| 3212787 | 382.1.1.17 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › ET | 0.50 | 33.0 | 3.51e-01 | 100.0% | 74.7% |
| 3722310 | 288.1.1.0 ↗ | a+b four layers › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases | 0.50 | 44.0 | 3.81e-01 | 99.1% | 77.6% |
| 4992851 | 5103.1.1.2 ↗ | a/b three-layered sandwiches › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › DUF1015 | 0.50 | 45.0 | 4.19e-01 | 98.1% | 81.5% |