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SRR1747052_scaffold_2_prodigal-single.1__X__X__00256

Bact-Vir

SRR1747052_scaffold_2_prodigal-single.1__X__X__00256

Identity

Kingdom:
phage

Quality

85.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 86-187
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3cp2A02 2.40.30.260 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.54 32.0 3.25e-01 100.0% 58.6%
5cflA02 3.40.50.12100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein 0.50 33.0 2.95e-01 100.0% 45.6%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4022291 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.54 44.0 3.77e-01 89.2% 84.7%
D2 medium residues 1-85
PDB
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4972934 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.87 63.0 4.58e-01 82.4% 29.8%
3164763 2004.1.1.99 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N 0.86 64.0 4.47e-01 77.6% 34.0%
2132278 2004.1.1.99 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N 0.80 61.0 4.42e-01 84.7% 30.4%