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SRR1747052_scaffold_2_prodigal-single.1__X__X__00309

Bact-Vir

SRR1747052_scaffold_2_prodigal-single.1__X__X__00309

Identity

Kingdom:
phage

Quality

91.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 35-121
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2lxxA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.57 42.0 3.59e-01 79.3% 54.6%
1cfyA00 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.53 39.0 3.47e-01 79.3% 54.9%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4043441 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.65 58.0 4.01e-01 100.0% 29.8%
None — 0.53 42.0 3.11e-01 86.2% 47.7%
4019772 109.2.1.20 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_125 0.53 39.0 2.46e-01 80.5% 90.5%
3958247 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 41.0 3.07e-01 87.4% 47.9%
3467280 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.50 42.0 2.68e-01 97.7% 82.2%