←Back to structures
SRR1747052_scaffold_2_prodigal-single.1__X__X__00366
Bact-VirSRR1747052_scaffold_2_prodigal-single.1__X__X__00366
Identity
- Kingdom:
- phage
Quality
88.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-141
Domain cluster:
rep: OP985600.1__WBF79001.1__SEA_BOLT007_33__00033__D612-769
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3v0aB03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.81 | 73.0 | 6.21e-01 | 100.0% | 62.4% |
| 8b55A01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.77 | 69.0 | 6.22e-01 | 99.3% | 72.6% |
| 3azwA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 71.0 | 5.82e-01 | 100.0% | 61.3% |
| 4c1wA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.74 | 69.0 | 6.14e-01 | 100.0% | 80.3% |
| 3dgtA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 66.0 | 5.19e-01 | 99.3% | 67.3% |
| 4dqaA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 67.0 | 5.71e-01 | 100.0% | 64.9% |
| 2v73A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 65.0 | 5.88e-01 | 100.0% | 78.1% |
| 2eigA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 63.0 | 5.31e-01 | 99.3% | 76.5% |
| 2a5zA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 62.0 | 5.15e-01 | 98.5% | 61.1% |
| 1ms5B02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 62.0 | 5.07e-01 | 99.3% | 54.0% |
| 1qu0C00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 63.0 | 5.63e-01 | 99.3% | 78.7% |
| 1pz7A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 61.0 | 5.46e-01 | 97.8% | 73.9% |
| 3flpA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 62.0 | 5.23e-01 | 100.0% | 66.8% |
| 1dhkB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 60.0 | 5.34e-01 | 99.3% | 74.4% |
| 3w9aA00 | 2.60.120.1160 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 59.0 | 4.93e-01 | 99.3% | 59.1% |
| 3zypA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 59.0 | 5.01e-01 | 99.3% | 70.5% |
| 1j1tA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 57.0 | 4.84e-01 | 98.5% | 74.6% |
| 1ux6A02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 56.0 | 4.87e-01 | 97.8% | 80.3% |
| 5xnrA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 56.0 | 4.66e-01 | 99.3% | 68.6% |
| 7b2sA01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.61 | 51.0 | 4.90e-01 | 94.1% | 78.7% |
| 2hevF00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 36.0 | 3.78e-01 | 99.3% | 64.3% |
| 1hn0A01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.58 | 42.0 | 3.85e-01 | 100.0% | 55.4% |
| 3loyA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 31.0 | 3.61e-01 | 94.9% | 71.3% |
| 1wmxA00 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.56 | 41.0 | 3.79e-01 | 100.0% | 59.5% |
| 1yq5A00 | 2.60.120.670 | Mainly Beta › Sandwich › Jelly Rolls › Minor capsid protein. | 0.55 | 37.0 | 3.65e-01 | 100.0% | 63.9% |
| 1qwoA01 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.53 | 39.0 | 2.88e-01 | 77.2% | 98.5% |
| 7r5yA01 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.52 | 38.0 | 2.77e-01 | 76.5% | 90.0% |
| 3lmlA03 | 2.60.40.4290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 30.0 | 3.76e-01 | 80.9% | 94.1% |
| 6obtA00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.51 | 41.0 | 3.28e-01 | 86.0% | 67.2% |
| 3kg6C00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.51 | 39.0 | 3.08e-01 | 80.9% | 65.7% |
| 1c16A01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.50 | 37.0 | 3.52e-01 | 77.2% | 92.0% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3505970 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.86 | 83.0 | 6.45e-01 | 100.0% | 55.4% |
| 5061004 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.75 | 71.0 | 5.90e-01 | 100.0% | 64.1% |
| 4121558 | 10.1.1.25 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Toxin_R_bind_N | 0.74 | 70.0 | 5.43e-01 | 100.0% | 59.6% |
| 3188970 | 10.1.1.73 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF26113 | 0.74 | 67.0 | 5.17e-01 | 98.5% | 65.4% |
| 3726566 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.73 | 68.0 | 5.18e-01 | 100.0% | 53.3% |
| 3866601 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.73 | 65.0 | 5.34e-01 | 100.0% | 55.3% |
| 168847 | 10.1.1.11 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 | 0.72 | 64.0 | 5.09e-01 | 96.3% | 67.0% |
| 3585302 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.72 | 66.0 | 5.82e-01 | 97.8% | 75.8% |
| 3865581 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.71 | 66.0 | 5.58e-01 | 100.0% | 66.8% |
| 3401269 | 10.1.1.5 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Pentaxin | 0.71 | 66.0 | 5.34e-01 | 99.3% | 56.5% |
| 1162823 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.71 | 67.0 | 5.64e-01 | 100.0% | 62.8% |
| 3544292 | 109.4.1.109 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 | 0.71 | 66.0 | 4.01e-01 | 100.0% | 17.8% |
| 3703874 | 10.1.1.56 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C | 0.70 | 65.0 | 5.23e-01 | 100.0% | 57.6% |
| 4596967 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.70 | 64.0 | 5.31e-01 | 99.3% | 75.5% |
| 3229459 | 10.1.1.92 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF26430 | 0.70 | 63.0 | 5.64e-01 | 99.3% | 70.5% |
| 3415312 | 10.1.1.1 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 | 0.69 | 65.0 | 5.62e-01 | 100.0% | 73.0% |
| 3414510 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.69 | 63.0 | 5.67e-01 | 98.5% | 77.8% |
| 1117 | 10.1.1.52 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SO2946-like_C | 0.69 | 62.0 | 5.15e-01 | 98.5% | 61.1% |
| 4072360 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.69 | 63.0 | 5.22e-01 | 99.3% | 63.7% |
| 4260682 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.69 | 61.0 | 5.44e-01 | 97.1% | 69.2% |
| 3991063 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.69 | 62.0 | 5.51e-01 | 96.3% | 79.5% |
| 3180289 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.69 | 64.0 | 5.24e-01 | 100.0% | 64.7% |
| 3929940 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.68 | 62.0 | 5.45e-01 | 98.5% | 71.5% |
| 4002730 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.68 | 62.0 | 5.43e-01 | 98.5% | 77.0% |
| 3394892 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.67 | 62.0 | 5.27e-01 | 97.8% | 79.5% |
| 3714006 | 10.1.1.56 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C | 0.67 | 61.0 | 5.05e-01 | 100.0% | 58.8% |
| 3794738 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.67 | 61.0 | 5.41e-01 | 100.0% | 73.8% |
| 3723348 | 10.1.1.73 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF26113 | 0.66 | 60.0 | 4.80e-01 | 100.0% | 61.7% |
| 3290360 | 10.1.1.40 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Arabino_trans_N | 0.65 | 59.0 | 5.49e-01 | 98.5% | 78.2% |
| 3896010 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.65 | 59.0 | 5.25e-01 | 97.1% | 71.1% |
| 4011408 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.65 | 59.0 | 4.98e-01 | 98.5% | 68.0% |
| 3192308 | 10.1.1.48 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Polysacc_lyase-like | 0.65 | 59.0 | 4.95e-01 | 98.5% | 68.0% |
| 5012226 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.65 | 58.0 | 5.17e-01 | 97.1% | 77.9% |
| 3813157 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.64 | 57.0 | 4.40e-01 | 100.0% | 60.4% |
| 3607773 | 10.1.1.56 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C | 0.63 | 57.0 | 4.77e-01 | 99.3% | 60.0% |
| 3892955 | 10.1.1.20 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TSP_C | 0.63 | 57.0 | 4.68e-01 | 98.5% | 71.0% |
| 3703666 | 10.1.1.56 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C | 0.63 | 46.0 | 4.24e-01 | 75.0% | 65.3% |
| 4002268 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.63 | 57.0 | 5.01e-01 | 98.5% | 73.5% |
| 2048191 | 10.1.1.54 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Sialidase-like_CBM | 0.62 | 56.0 | 4.89e-01 | 98.5% | 72.4% |
| 3183973 | 10.1.1.26 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C | 0.62 | 53.0 | 5.06e-01 | 98.5% | 81.3% |
| 3704683 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.61 | 53.0 | 5.12e-01 | 94.1% | 93.5% |
| 5083095 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 40.0 | 3.80e-01 | 100.0% | 57.3% |
| 3231212 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.59 | 36.0 | 3.48e-01 | 100.0% | 53.3% |
| 5043798 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.57 | 49.0 | 4.47e-01 | 94.9% | 76.8% |
| 4160173 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.53 | 39.0 | 3.92e-01 | 76.5% | 89.3% |
| 4956010 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 31.0 | 3.66e-01 | 96.3% | 90.0% |
D2
high
residues 174-261
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4perB00 | 3.10.130.10 | Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain | 0.62 | 50.0 | 4.71e-01 | 89.8% | 78.0% |
| 1kvzA00 | 3.10.130.10 | Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain | 0.61 | 50.0 | 4.75e-01 | 92.0% | 90.7% |
| 4owzA00 | 3.10.130.10 | Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain | 0.60 | 48.0 | 4.27e-01 | 90.9% | 79.1% |
| 3eaaA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.55 | 46.0 | 3.78e-01 | 90.9% | 82.1% |
| 1wnhA01 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 37.0 | 3.64e-01 | 88.6% | 63.0% |
| 1o4yA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 46.0 | 3.32e-01 | 100.0% | 39.6% |
| 2dawA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.52 | 38.0 | 3.37e-01 | 98.9% | 51.1% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3318594 | 909.1.1.0 ↗ | few secondary structure elements › Cholecystokinin A receptor, N-domain › Cholecystokinin A receptor, N-domain › Cholecystokinin A receptor, N-domain | 0.58 | 44.0 | 4.57e-01 | 96.6% | 90.0% |
| 4064072 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.57 | 45.0 | 4.15e-01 | 89.8% | 66.1% |
| 4929752 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.56 | 46.0 | 3.85e-01 | 89.8% | 83.2% |
| 3592708 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 41.0 | 3.44e-01 | 79.5% | 63.1% |
| 3706183 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.55 | 43.0 | 3.91e-01 | 85.2% | 83.3% |
| 3668642 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.54 | 36.0 | 3.36e-01 | 88.6% | 53.0% |
| 4120353 | 7026.1.1.5 ↗ | beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › ATG2_CAD | 0.52 | 45.0 | 2.72e-01 | 100.0% | 27.8% |
| 3683638 | 7026.1.1.13 ↗ | beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › Hobbit | 0.51 | 44.0 | 3.42e-01 | 100.0% | 77.1% |