←Back to structures
SRR1747052_scaffold_7_prodigal-single.1__X__X__00076
Bact-VirSRR1747052_scaffold_7_prodigal-single.1__X__X__00076
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-112
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3opbA01 | 1.25.10.100 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › | 0.62 | 52.0 | 3.91e-01 | 93.8% | 40.1% |
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.59 | 48.0 | 4.51e-01 | 85.7% | 85.0% |
| 4ap2B01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.58 | 47.0 | 4.48e-01 | 88.4% | 94.0% |
| 3woyA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.57 | 51.0 | 3.99e-01 | 100.0% | 46.3% |
| 3au3A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.57 | 48.0 | 3.62e-01 | 95.5% | 46.8% |
| 7dvqK01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.57 | 49.0 | 4.32e-01 | 97.3% | 85.0% |
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.54 | 41.0 | 3.71e-01 | 81.2% | 98.2% |
| 4q5nA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 41.0 | 4.14e-01 | 79.5% | 83.9% |
| 2wzkA01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.52 | 43.0 | 4.14e-01 | 90.2% | 96.1% |
| 1k8kG00 | 1.25.40.190 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Actin-related protein 2/3 complex subunit 5 | 0.52 | 44.0 | 4.15e-01 | 100.0% | 78.4% |
| 1k20A01 | 3.90.1640.10 | Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › inorganic pyrophosphatase (n-terminal core) | 0.52 | 44.0 | 3.71e-01 | 93.8% | 86.8% |
| 2uvaG01 | 1.20.1050.120 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 39.0 | 3.66e-01 | 81.2% | 83.8% |
| 2jbrA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.50 | 39.0 | 3.30e-01 | 82.1% | 93.5% |
| 4aifA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 41.0 | 3.84e-01 | 91.1% | 75.0% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3247942 | 109.16.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › TROVE domain-like › TROVE domain-like › DUF2828 | 0.84 | 78.0 | 5.77e-01 | 100.0% | 45.2% |
| 3703281 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 53.0 | 3.66e-01 | 93.8% | 44.0% |
| 4392251 | 5000.4.1.1 ↗ | alpha arrays › Toxins' membrane translocation domains › delta-Endotoxin (insectocide), N-terminal domain › delta-Endotoxin (insectocide), N-terminal domain › Endotoxin_N | 0.60 | 50.0 | 3.67e-01 | 91.1% | 45.3% |
| 3995273 | 109.4.1.1414 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TTI1_C | 0.57 | 50.0 | 4.29e-01 | 98.2% | 63.2% |
| 3275932 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 50.0 | 3.62e-01 | 100.0% | 32.8% |
| 2492497 | 601.33.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain › CHAD | 0.57 | 39.0 | 3.56e-01 | 89.3% | 52.3% |
| 3676679 | 109.4.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm | 0.57 | 50.0 | 3.71e-01 | 98.2% | 52.3% |
| 3714307 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 49.0 | 4.38e-01 | 97.3% | 95.0% |
| 3822986 | 109.4.1.3 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm,Arm_3 | 0.56 | 49.0 | 3.47e-01 | 100.0% | 30.6% |
| 3430030 | 192.8.1.397 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › DUF4220 | 0.55 | 43.0 | 3.79e-01 | 82.1% | 69.1% |
| 3784177 | 604.1.1.132 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › KAR9 | 0.55 | 42.0 | 3.81e-01 | 81.2% | 85.2% |
| 4222865 | 109.4.1.749 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › KAP | 0.55 | 48.0 | 3.39e-01 | 100.0% | 29.8% |
| 3799 | 603.6.1.1 ↗ | alpha bundles › STAT-like › MukF C-terminal domain-like › MukF C-terminal domain-like › MukF_M | 0.54 | 41.0 | 3.71e-01 | 81.2% | 98.2% |
| 3183250 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.53 | 45.0 | 3.19e-01 | 94.6% | 88.9% |
| 4097515 | 4198.1.1.1 ↗ | alpha arrays › TerB-like › TerB-like › TerB-like › TerB | 0.52 | 41.0 | 3.97e-01 | 85.7% | 100.0% |
| None | — | 0.52 | 43.0 | 4.24e-01 | 92.9% | 86.4% | |
| 3815474 | 109.4.1.1290 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_19 | 0.51 | 43.0 | 3.74e-01 | 98.2% | 58.3% |
| 3898349 | 4121.1.1.2 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like | 0.50 | 45.0 | 3.56e-01 | 100.0% | 77.4% |
D2
high
residues 207-430
Domain cluster:
rep: ON548430__URC17513.1__X__00032__D278-484
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25043.1 best | DUF7788 | 121.1 | 5.80e-35 | 90.2% | 82.8% |
D3
medium
residues 124-206
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11443.14 best | DUF2828 | 35.8 | 6.30e-09 | 98.8% | 14.6% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ny9A00 | 1.10.490.50 | Mainly Alpha › Orthogonal Bundle › Globin-like › Antibiotic binding domain of TipA-like multidrug resistance regulators | 0.53 | 39.0 | 3.79e-01 | 79.5% | 93.6% |
| 4c9bB00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 45.0 | 3.21e-01 | 98.8% | 71.5% |
| 2guzA00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.51 | 38.0 | 4.07e-01 | 98.8% | 93.0% |
| 1peqA02 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.51 | 43.0 | 2.71e-01 | 96.4% | 46.9% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3333939 | 109.16.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › TROVE domain-like › TROVE domain-like › DUF2828 | 0.90 | 81.0 | 5.14e-01 | 98.8% | 23.3% |
| 3247942 | 109.16.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › TROVE domain-like › TROVE domain-like › DUF2828 | 0.89 | 79.0 | 5.33e-01 | 97.6% | 28.9% |
| 3424971 | 109.16.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › TROVE domain-like › TROVE domain-like › DUF2828 | 0.88 | 70.0 | 4.63e-01 | 90.4% | 23.8% |
| 3640451 | 109.16.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › TROVE domain-like › TROVE domain-like › DUF2828 | 0.82 | 70.0 | 4.42e-01 | 91.6% | 20.5% |
| 5079028 | 2006.1.4.36 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_3 | 0.60 | 48.0 | 4.11e-01 | 91.6% | 53.1% |
| 3602166 | 2006.1.4.36 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_3 | 0.57 | 46.0 | 3.86e-01 | 91.6% | 53.3% |
| 3676413 | 109.4.1.1260 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long | 0.56 | 47.0 | 3.58e-01 | 98.8% | 41.3% |
| 3640058 | 109.4.1.1140 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_PEP5_VPS11 | 0.54 | 46.0 | 3.17e-01 | 100.0% | 25.1% |
| 4989833 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.54 | 43.0 | 3.90e-01 | 92.8% | 67.7% |
| 4016888 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.51 | 41.0 | 2.81e-01 | 92.8% | 31.0% |