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SRR1747052_scaffold_7_prodigal-single.1__X__X__00086

Bact-Vir

SRR1747052_scaffold_7_prodigal-single.1__X__X__00086

Identity

Kingdom:
phage

Quality

91.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 42-109
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5xmvA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.91 63.0 4.08e-01 100.0% 18.6%
3dupA02 3.30.750.160 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › 0.55 38.0 3.28e-01 72.1% 57.5%
1z3xA01 1.25.40.620 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 35.0 2.67e-01 73.5% 30.0%
3b0cW00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.52 41.0 4.02e-01 83.8% 95.9%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3247166 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.73 44.0 4.27e-01 86.8% 54.7%
4189420 102.2.1.4 ↗ alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH 0.60 46.0 3.99e-01 82.4% 64.8%
4203412 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.56 39.0 3.04e-01 72.1% 83.3%
3514886 4168.1.1.1 ↗ alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain › HAMP 0.55 38.0 3.91e-01 70.6% 78.5%