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SRR1747052_scaffold_7_prodigal-single.1__X__X__00216
Bact-VirSRR1747052_scaffold_7_prodigal-single.1__X__X__00216
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 18-69_113-135_221-238
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 42.0 | 4.98e-01 | 100.0% | 93.7% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 38.0 | 4.46e-01 | 95.7% | 95.2% |
| 1m1gB03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 35.0 | 4.19e-01 | 92.5% | 88.9% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 35.0 | 4.07e-01 | 91.4% | 83.3% |
| 1vwxM01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 35.0 | 3.71e-01 | 94.6% | 68.2% |
| 3wl5A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 38.0 | 2.66e-01 | 75.3% | 87.6% |
| 3nrlA00 | 2.40.10.390 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.52 | 35.0 | 4.06e-01 | 97.8% | 97.1% |
| 4ic5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 42.0 | 4.10e-01 | 89.2% | 87.5% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.51 | 35.0 | 3.31e-01 | 90.3% | 59.6% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3617111 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.73 | 44.0 | 4.54e-01 | 94.6% | 63.3% |
| 3914746 | 4.1.1.128 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_4 | 0.67 | 42.0 | 4.80e-01 | 100.0% | 84.3% |
| 3622052 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 42.0 | 4.36e-01 | 95.7% | 69.4% |
| 3597513 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 39.0 | 4.79e-01 | 100.0% | 100.0% |
| 3465976 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 39.0 | 4.57e-01 | 95.7% | 86.2% |
| 3922679 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.65 | 36.0 | 4.61e-01 | 90.3% | 100.0% |
| 3786430 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 35.0 | 4.63e-01 | 90.3% | 100.0% |
| 3315100 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 39.0 | 4.50e-01 | 94.6% | 86.2% |
| 4997059 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.64 | 45.0 | 4.94e-01 | 96.8% | 90.7% |
| 3304602 | 4.1.1.427 ↗ | beta barrels › SH3 › SH3 › SH3 › F-box | 0.64 | 40.0 | 4.02e-01 | 95.7% | 62.1% |
| 3936430 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 39.0 | 4.16e-01 | 94.6% | 71.2% |
| 3935469 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.63 | 45.0 | 5.06e-01 | 96.8% | 97.1% |
| 3784334 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.63 | 37.0 | 4.47e-01 | 96.8% | 90.0% |
| 3359784 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.63 | 39.0 | 4.50e-01 | 95.7% | 87.7% |
| 3340900 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 39.0 | 4.48e-01 | 95.7% | 87.7% |
| 3707347 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 36.0 | 4.50e-01 | 90.3% | 96.4% |
| 3828348 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 38.0 | 4.44e-01 | 94.6% | 87.7% |
| 3662072 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 38.0 | 3.55e-01 | 95.7% | 47.5% |
| 3853598 | 4.25.1.2 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD | 0.62 | 42.0 | 4.48e-01 | 94.6% | 80.0% |
| 3313119 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.62 | 38.0 | 4.10e-01 | 95.7% | 71.2% |
| 3238955 | 4.1.1.377 ↗ | beta barrels › SH3 › SH3 › SH3 › MSL3_chromo-like | 0.62 | 45.0 | 4.80e-01 | 94.6% | 87.5% |
| 3463181 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 39.0 | 4.34e-01 | 95.7% | 82.9% |
| 3612184 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 37.0 | 4.46e-01 | 93.5% | 93.3% |
| 3356591 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 39.0 | 3.91e-01 | 94.6% | 62.1% |
| 3408592 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 38.0 | 3.74e-01 | 95.7% | 57.0% |
| 3835464 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 39.0 | 4.43e-01 | 95.7% | 85.7% |
| 3622139 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 41.0 | 4.17e-01 | 96.8% | 70.0% |
| 3826746 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 38.0 | 4.12e-01 | 95.7% | 73.8% |
| 3570369 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 40.0 | 4.06e-01 | 95.7% | 68.9% |
| 3449268 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 39.0 | 4.04e-01 | 95.7% | 70.6% |
| 3433070 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 38.0 | 4.27e-01 | 95.7% | 84.1% |
| 4069543 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.60 | 40.0 | 4.36e-01 | 95.7% | 85.3% |
| 5042869 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.59 | 38.0 | 4.51e-01 | 94.6% | 95.4% |
| 3927214 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 40.0 | 3.70e-01 | 95.7% | 55.0% |
| 3424116 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.59 | 40.0 | 3.72e-01 | 97.8% | 55.0% |
| 3485965 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 36.0 | 4.27e-01 | 93.5% | 95.0% |
| 3824699 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.57 | 39.0 | 4.51e-01 | 95.7% | 100.0% |
| 3429682 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 38.0 | 4.16e-01 | 94.6% | 84.0% |
| 3500542 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 38.0 | 3.88e-01 | 96.8% | 70.0% |
| 5000741 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.57 | 36.0 | 4.12e-01 | 95.7% | 90.8% |
| 5066224 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.57 | 38.0 | 3.90e-01 | 95.7% | 71.1% |
| 3709896 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 42.0 | 4.42e-01 | 98.9% | 88.2% |
| 3302166 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.56 | 38.0 | 4.37e-01 | 95.7% | 98.5% |
| 3931055 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.56 | 41.0 | 4.50e-01 | 95.7% | 96.0% |
| 4966530 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.56 | 34.0 | 3.94e-01 | 97.8% | 82.9% |
| 3811611 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 38.0 | 4.12e-01 | 95.7% | 86.7% |
| 3393360 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.55 | 41.0 | 3.81e-01 | 100.0% | 62.6% |
| 3256053 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.55 | 41.0 | 4.19e-01 | 97.8% | 80.0% |
| 3213215 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 42.0 | 3.97e-01 | 95.7% | 66.1% |
| 3399965 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 38.0 | 3.88e-01 | 95.7% | 73.3% |
| 3627576 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 36.0 | 4.29e-01 | 90.3% | 100.0% |
| 1826911 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.53 | 38.0 | 4.00e-01 | 94.6% | 80.5% |
| 3219441 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.52 | 40.0 | 4.25e-01 | 93.5% | 95.0% |
| 3661948 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.51 | 37.0 | 4.00e-01 | 98.9% | 93.3% |
D2
medium
residues 70-112_136-220
Domain cluster:
rep: SRR1747043_scaffold_13_prodigal-single.1__X__X__00026__D72-249
Pfam (2)
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bdwA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.55 | 41.0 | 4.22e-01 | 100.0% | 81.3% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.52 | 21.0 | 3.29e-01 | 96.1% | 100.0% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 23.0 | 3.02e-01 | 93.0% | 76.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4015023 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.64 | 43.0 | 4.44e-01 | 100.0% | 72.5% |
| 4395927 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.57 | 47.0 | 4.75e-01 | 100.0% | 86.2% |
| 5050433 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 21.0 | 3.23e-01 | 91.4% | 95.6% |
| 3245906 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.53 | 45.0 | 4.35e-01 | 100.0% | 80.7% |
| 4932588 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.53 | 27.0 | 3.52e-01 | 94.5% | 93.8% |
| 3961546 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.52 | 27.0 | 3.45e-01 | 94.5% | 93.8% |
| 3622389 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 24.0 | 3.27e-01 | 93.8% | 86.2% |
| 3571487 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 29.0 | 3.72e-01 | 95.3% | 98.6% |
| 3404643 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 29.0 | 3.67e-01 | 93.8% | 100.0% |
| 3373330 | 4.1.1.337 ↗ | beta barrels › SH3 › SH3 › SH3 › CSD_RNase_II | 0.51 | 25.0 | 3.23e-01 | 95.3% | 81.3% |
| 3502290 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 23.0 | 3.23e-01 | 91.4% | 91.7% |
| 3702154 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 24.0 | 3.07e-01 | 86.7% | 77.3% |