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SRR1747052_scaffold_7_prodigal-single.1__X__X__00217
Bact-VirSRR1747052_scaffold_7_prodigal-single.1__X__X__00217
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 87-228
Domain cluster:
rep: SRR1747043_scaffold_13_prodigal-single.1__X__X__00026__D72-249
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19789.7 best | DUF6273 | 55.6 | 8.10e-15 | 98.6% | 84.5% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7jptA03 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.53 | 43.0 | 4.55e-01 | 100.0% | 95.2% |
| 3j7yD02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 27.0 | 3.42e-01 | 97.9% | 84.0% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 23.0 | 3.20e-01 | 86.6% | 85.3% |
| 1vwxA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 26.0 | 3.37e-01 | 97.9% | 87.5% |
| 4o1nD01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.50 | 29.0 | 3.23e-01 | 100.0% | 69.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4872550 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.64 | 42.0 | 4.65e-01 | 100.0% | 82.6% |
| 4180572 | 209.1.1.17 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › PF29631 | 0.59 | 36.0 | 4.33e-01 | 99.3% | 93.3% |
| 3931907 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.59 | 44.0 | 4.48e-01 | 100.0% | 78.6% |
| 3245906 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.54 | 43.0 | 4.30e-01 | 100.0% | 81.4% |
| 4023922 | 4.1.1.38 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C | 0.52 | 27.0 | 2.74e-01 | 98.6% | 49.3% |
| 4971470 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.51 | 27.0 | 3.48e-01 | 91.5% | 94.7% |
| 4078549 | 4.1.1.38 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C | 0.51 | 26.0 | 2.61e-01 | 98.6% | 46.0% |
| 2664854 | 4.1.1.38 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C | 0.50 | 26.0 | 3.01e-01 | 97.2% | 67.6% |
| 3930456 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 24.0 | 3.31e-01 | 90.1% | 95.4% |