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SRR1747052_scaffold_7_prodigal-single.1__X__X__00226

Bact-Vir

SRR1747052_scaffold_7_prodigal-single.1__X__X__00226

Identity

Kingdom:
phage

Quality

61.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 22-86
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mopA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.54 38.0 3.26e-01 72.3% 78.1%
4kmfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 34.0 3.53e-01 70.8% 80.6%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4980888 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 39.0 3.93e-01 78.5% 66.2%
5042174 101.1.2.652 ↗ alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.60 44.0 3.53e-01 80.0% 91.1%
3754249 109.26.1.12 ↗ alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › TPR_Nup160_C, TPR_NUP160_120_M 0.57 46.0 3.24e-01 90.8% 45.3%
5079698 101.1.2.140 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.57 38.0 3.97e-01 72.3% 75.0%
5047331 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 34.0 3.12e-01 72.3% 44.4%
3259021 2004.1.1.208 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 0.50 39.0 2.73e-01 84.6% 69.3%