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SRR1747052_scaffold_7_prodigal-single.1__X__X__00268
Bact-VirSRR1747052_scaffold_7_prodigal-single.1__X__X__00268
Identity
- Kingdom:
- phage
Quality
94.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-68
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2keyA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.82 | 74.0 | 5.79e-01 | 100.0% | 49.1% |
| 7d5qA01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.80 | 68.0 | 4.65e-01 | 92.7% | 69.8% |
| 2qv6B02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.72 | 56.0 | 4.31e-01 | 96.4% | 37.7% |
| 3czpB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 60.0 | 4.04e-01 | 100.0% | 64.8% |
| 1n0uA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 60.0 | 3.99e-01 | 100.0% | 76.2% |
| 3fmcC01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.60 | 51.0 | 3.25e-01 | 100.0% | 40.3% |
| 3gl5A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.60 | 54.0 | 3.59e-01 | 100.0% | 36.5% |
| 1qasA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.54 | 39.0 | 3.43e-01 | 96.4% | 50.0% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4959184 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.95 | 87.0 | 7.01e-01 | 100.0% | 55.8% |
| 4996189 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.94 | 85.0 | 6.63e-01 | 100.0% | 50.5% |
| 3587101 | 186.1.1.5 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 | 0.94 | 86.0 | 6.75e-01 | 100.0% | 51.4% |
| 4173849 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.92 | 81.0 | 6.29e-01 | 100.0% | 47.3% |
| 4979940 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.90 | 84.0 | 6.51e-01 | 100.0% | 50.0% |
| 4034068 | 186.1.1.5 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_3 | 0.84 | 73.0 | 5.99e-01 | 100.0% | 54.0% |
| 134501 | 186.1.1.3 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_5 | 0.82 | 74.0 | 5.95e-01 | 100.0% | 53.4% |
| 3952720 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.81 | 66.0 | 4.38e-01 | 89.1% | 47.8% |
| 5000879 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.80 | 74.0 | 5.62e-01 | 100.0% | 47.0% |
| 3281447 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.77 | 62.0 | 3.61e-01 | 89.1% | 22.4% |
| 3555108 | 109.4.1.235 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SRP68 | 0.66 | 56.0 | 3.26e-01 | 94.5% | 14.2% |
| 3164600 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.64 | 52.0 | 3.32e-01 | 87.3% | 36.9% |
| 3216945 | 101.1.1.102 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Lin-8 | 0.62 | 49.0 | 3.89e-01 | 89.1% | 74.0% |