SRR1747055_scaffold_2_prodigal-single.1XX__00006

Bact-Vir

SRR1747055_scaffold_2_prodigal-single.1__X__X__00006

Identity

69.1 mean pLDDT

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 149-277

PDB

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1yu0A02	2.80.20.10	Mainly Beta › Trefoil › Tail fiber receptor-binding protein › Tail fiber receptor-binding protein	0.64	54.0	5.15e-01	96.9%	78.1%
3sd2A01	2.60.40.3080	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.52	31.0	3.89e-01	87.6%	100.0%
3k44B00	3.30.2450.30	Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold ›	0.51	40.0	3.95e-01	84.5%	98.6%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3921177	3761.1.1.0 ↗	beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related	0.61	27.0	3.99e-01	73.6%	96.4%
3989890	4958.1.1.0 ↗	a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit	0.52	23.0	3.13e-01	72.1%	81.5%
4317800	223.1.1.0 ↗	a+b three layers › Profilin-like › sensor domains › sensor domains	0.51	28.0	2.81e-01	98.4%	47.9%

D2 high residues 293-382

PDB

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2d93A00	2.60.120.10	Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls	0.50	32.0	2.82e-01	97.8%	43.3%

D3 medium residues 2-96

PDB

Domain cluster: rep: SR-VP_0-2_scaffold_141_4939684_prodigal-single.1__X__X__00270__D3-85

D4 medium residues 386-458

PDB

D5 medium residues 459-523

PDB