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SRR1747055_scaffold_2_prodigal-single.1__X__X__00036

Bact-Vir

SRR1747055_scaffold_2_prodigal-single.1__X__X__00036

Identity

Kingdom:
phage

Quality

89.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-65
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hvfA00 3.40.5.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › Ribosomal protein L9, N-terminal domain 0.62 39.0 4.25e-01 78.1% 78.8%
4v19I01 3.40.5.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › Ribosomal protein L9, N-terminal domain 0.54 40.0 4.20e-01 98.4% 89.5%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4024535 4076.1.1.1 ↗ a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N 0.61 45.0 4.78e-01 89.1% 90.9%
4220222 4076.1.1.1 ↗ a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N 0.57 40.0 4.27e-01 100.0% 85.5%
4316117 4076.1.1.1 ↗ a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N 0.57 40.0 4.28e-01 100.0% 85.5%
5067631 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.54 39.0 3.41e-01 81.2% 94.5%