←Back to structures

SRR1747055_scaffold_2_prodigal-single.1__X__X__00116

Bact-Vir

SRR1747055_scaffold_2_prodigal-single.1__X__X__00116

Identity

Kingdom:
phage

Quality

81.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-48
PDB
Domain cluster: representative
CATH (67)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ffyA00 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.74 58.0 4.50e-01 100.0% 38.4%
3bgyA00 3.20.100.10 Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like 0.72 62.0 4.00e-01 100.0% 47.3%
4avaA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.70 57.0 4.09e-01 100.0% 30.6%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.69 56.0 4.02e-01 91.5% 75.7%
4iajA00 3.30.1490.390 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 0.67 55.0 4.88e-01 100.0% 63.2%
1cbfA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.67 54.0 4.05e-01 100.0% 35.5%
1s4dE02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.66 54.0 3.88e-01 100.0% 30.9%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.65 55.0 4.54e-01 100.0% 55.4%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.65 54.0 4.96e-01 100.0% 75.8%
6l9iA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 48.0 3.29e-01 100.0% 21.7%
2nmlA00 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.63 54.0 4.28e-01 100.0% 72.0%
3l5iA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 53.0 4.33e-01 100.0% 51.1%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.62 55.0 4.09e-01 100.0% 54.6%
7y8sB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 53.0 4.39e-01 100.0% 54.8%
5u55A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 48.0 3.65e-01 100.0% 34.4%
4wiwA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.62 50.0 4.51e-01 95.7% 100.0%
1unnC00 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.61 54.0 4.12e-01 100.0% 49.5%
6julA02 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.61 53.0 4.25e-01 100.0% 59.4%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.61 42.0 3.31e-01 83.0% 31.5%
4ic5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.61 53.0 4.13e-01 100.0% 56.7%
2f4nB02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.60 49.0 3.99e-01 93.6% 70.2%
2f1eA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.60 51.0 3.94e-01 100.0% 48.3%
2v3sA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.60 51.0 4.10e-01 97.9% 97.9%
1rlhA02 3.40.1520.10 Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › Ta1353-like 0.60 50.0 3.99e-01 97.9% 100.0%
1gcbA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.60 50.0 2.98e-01 97.9% 25.7%
2jvuA00 2.60.40.2290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 52.0 4.12e-01 100.0% 51.0%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.60 52.0 4.01e-01 100.0% 56.9%
5hmaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.60 50.0 4.00e-01 100.0% 55.8%
1jx4A04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.59 51.0 4.10e-01 100.0% 60.2%
1cfbA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 51.0 3.98e-01 100.0% 45.3%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.59 50.0 3.76e-01 100.0% 52.5%
7bjkA02 3.55.40.20 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain 0.59 44.0 3.43e-01 100.0% 35.4%
2npnA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.58 49.0 3.83e-01 100.0% 45.9%
4llgM00 3.10.20.510 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor 0.58 48.0 4.74e-01 97.9% 94.0%
1ywlA00 3.40.1440.10 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease 0.58 48.0 3.92e-01 100.0% 53.1%
3nd1A02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.57 47.0 3.71e-01 100.0% 45.5%
3zoqC00 6.20.250.30 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.57 47.0 4.64e-01 100.0% 92.5%
3rwnB00 2.60.120.1120 Mainly Beta › Sandwich › Jelly Rolls › Sf6-type phage tail needle knob 0.57 49.0 3.42e-01 97.9% 37.7%
1o5lA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 46.0 3.52e-01 100.0% 36.4%
2htdB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 48.0 3.61e-01 100.0% 45.2%
1rfeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 48.0 3.54e-01 100.0% 40.4%
2wliA02 2.60.40.1400 Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 0.57 44.0 3.16e-01 91.5% 70.2%
3h8hA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.56 41.0 3.48e-01 97.9% 43.5%
2qsdB02 3.50.100.10 Alpha Beta › 3-Layer(bba) Sandwich › protein il1583 fold › protein il1583 domain 0.56 43.0 3.66e-01 100.0% 51.3%
3loiA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 47.0 3.30e-01 100.0% 28.7%
3weeB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 47.0 3.26e-01 100.0% 33.3%
5c7qB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.56 45.0 3.11e-01 95.7% 66.1%
2fhqA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 46.0 3.41e-01 100.0% 42.2%
4kncA02 2.60.120.1380 Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module 0.55 47.0 3.58e-01 100.0% 47.0%
2ebfX01 3.10.670.10 Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. 0.55 45.0 3.08e-01 100.0% 38.3%
4ctaA02 3.30.70.2860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 43.0 3.76e-01 89.4% 96.0%
5gv0A00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.55 38.0 2.67e-01 70.2% 54.3%
2asfA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 47.0 3.51e-01 100.0% 44.8%
3rj2X00 2.60.120.1150 Mainly Beta › Sandwich › Jelly Rolls › 0.54 45.0 3.39e-01 100.0% 35.3%
2i51B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 45.0 3.09e-01 100.0% 30.4%
5inwA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.54 38.0 2.93e-01 76.6% 51.9%
3waiA02 2.60.40.3390 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 43.0 3.63e-01 100.0% 57.0%
1s3rA04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.53 45.0 3.51e-01 100.0% 45.9%
1dgsA02 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.53 44.0 3.63e-01 100.0% 53.7%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.53 41.0 2.99e-01 97.9% 26.7%
4ksnA00 6.20.250.80 Special › Other non-globular › Double Stranded RNA Binding Domain › 0.52 44.0 4.03e-01 100.0% 86.2%
5yjlD01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 42.0 3.17e-01 100.0% 35.2%
2hhzA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 41.0 3.12e-01 100.0% 39.9%
2c60A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.51 41.0 3.51e-01 91.5% 93.7%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 42.0 3.41e-01 100.0% 66.7%
2jz6A01 2.30.170.40 Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L28/L24 0.51 36.0 3.62e-01 91.5% 76.0%
1bd3A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 38.0 2.55e-01 89.4% 67.9%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1937092 1137.1.1.1 ↗ a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.74 58.0 4.49e-01 100.0% 38.4%
3715676 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 57.0 4.59e-01 100.0% 45.6%
3509521 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.72 53.0 3.79e-01 83.0% 77.3%
3723454 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.70 55.0 3.80e-01 100.0% 25.6%
3703463 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.69 55.0 2.95e-01 100.0% 3.7%
3662726 1137.1.1.0 ↗ a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.69 54.0 4.18e-01 100.0% 37.4%
5078886 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.69 55.0 4.26e-01 100.0% 39.1%
224066 822.3.1.1 ↗ a+b two layers › GYF/BRK domain-like › conserved domain protein SP_1775 › conserved domain protein SP_1775 › DUF4649 0.67 56.0 4.90e-01 100.0% 62.3%
4030365 245.1.1.0 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.67 52.0 4.07e-01 100.0% 39.0%
3789199 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.67 49.0 3.79e-01 83.0% 76.5%
4489065 1137.1.1.1 ↗ a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.66 54.0 3.95e-01 100.0% 34.4%
3924200 2484.1.1.153 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 0.66 56.0 3.46e-01 100.0% 24.0%
3508572 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.65 55.0 3.39e-01 100.0% 24.1%
4022609 101.1.2.115 ↗ alpha arrays › HTH › HTH › winged helix domain › CDC27 0.65 52.0 3.74e-01 100.0% 29.4%
5049794 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.65 57.0 4.07e-01 100.0% 37.2%
4398420 1137.1.1.0 ↗ a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.65 53.0 4.09e-01 100.0% 38.3%
3404526 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 56.0 4.51e-01 100.0% 50.5%
3987692 822.3.1.1 ↗ a+b two layers › GYF/BRK domain-like › conserved domain protein SP_1775 › conserved domain protein SP_1775 › DUF4649 0.64 54.0 4.83e-01 100.0% 68.6%
4943252 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.64 56.0 4.01e-01 100.0% 37.2%
None — 0.64 55.0 4.42e-01 100.0% 73.7%
4026461 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 54.0 4.04e-01 100.0% 54.8%
4151900 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.63 54.0 3.86e-01 100.0% 36.8%
3590261 822.3.1.1 ↗ a+b two layers › GYF/BRK domain-like › conserved domain protein SP_1775 › conserved domain protein SP_1775 › DUF4649 0.63 50.0 4.58e-01 97.9% 70.6%
3489385 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 49.0 3.63e-01 100.0% 32.8%
5034902 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.62 53.0 3.81e-01 100.0% 35.2%
3612075 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 48.0 3.20e-01 100.0% 20.5%
4031235 3986.2.1.2 ↗ a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd › DUF2922 0.61 54.0 4.73e-01 100.0% 87.1%
4003814 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.61 52.0 3.72e-01 97.9% 39.3%
4107956 1137.1.1.0 ↗ a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.61 47.0 3.65e-01 100.0% 35.8%
3274993 10.12.1.52 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_8 0.60 47.0 2.89e-01 100.0% 11.7%
4928637 2498.1.1.6 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3 0.60 50.0 2.87e-01 100.0% 9.6%
3600733 1137.1.1.0 ↗ a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.60 49.0 3.69e-01 100.0% 34.3%
3527623 239.4.1.0 ↗ beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain 0.59 50.0 3.91e-01 100.0% 71.8%
3615237 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.59 49.0 2.97e-01 100.0% 45.8%
4979507 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.59 50.0 3.58e-01 100.0% 36.2%
4007508 3115.6.1.2 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.58 48.0 4.81e-01 100.0% 90.0%
4154378 4232.1.1.1 ↗ few secondary structure elements › Ribosomal protein bL28-related › Ribosomal protein bL28-related › Ribosomal protein L28 › Ribosomal_L28 0.58 40.0 3.62e-01 83.0% 52.3%
3975705 3115.6.1.0 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon 0.58 48.0 4.79e-01 100.0% 90.0%
4950851 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 47.0 4.80e-01 93.6% 97.8%
5047755 2492.1.1.7 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › FdhD-NarQ 0.58 50.0 3.60e-01 100.0% 34.3%
4259223 210.1.3.5 ↗ a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 0.57 46.0 3.06e-01 100.0% 19.6%
4004704 3115.6.1.2 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.57 47.0 4.77e-01 100.0% 100.0%
3340123 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.57 47.0 3.94e-01 100.0% 54.4%
4425813 228.1.1.1 ↗ a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C 0.57 43.0 3.28e-01 100.0% 33.3%
5027350 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.57 48.0 3.52e-01 100.0% 34.1%
3326231 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.56 47.0 2.98e-01 93.6% 39.3%
3969006 3115.6.1.2 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.56 46.0 4.66e-01 100.0% 100.0%
2870324 4012.3.1.1 ↗ a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9 › Cas9_PI 0.56 44.0 4.27e-01 97.9% 94.8%
4397568 821.1.1.1 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.56 49.0 3.99e-01 100.0% 58.9%
4024947 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 43.0 3.36e-01 100.0% 36.5%
3968122 3115.6.1.2 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.56 45.0 4.62e-01 97.9% 97.8%
5014684 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.56 47.0 4.50e-01 100.0% 86.2%
3961811 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.56 38.0 2.81e-01 78.7% 68.5%
3942510 821.1.1.1 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.56 48.0 3.86e-01 100.0% 55.8%
3658595 2.1.1.130 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.55 37.0 3.38e-01 87.2% 47.1%
3492427 384.1.1.1 ↗ few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI 0.55 41.0 3.78e-01 93.6% 58.7%
3504586 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.55 46.0 3.32e-01 100.0% 31.6%
4669741 821.1.1.1 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.55 47.0 3.81e-01 100.0% 55.8%
4158495 821.1.1.1 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.54 45.0 3.79e-01 100.0% 53.3%
5046850 821.1.1.1 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.54 47.0 3.86e-01 100.0% 61.1%
4958689 821.1.1.14 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF2797 0.54 43.0 4.03e-01 100.0% 71.7%
4557537 821.1.1.1 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.54 46.0 3.81e-01 100.0% 58.9%
3601115 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.54 44.0 3.61e-01 100.0% 89.0%
3216210 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.54 44.0 4.42e-01 100.0% 98.0%
4997210 821.1.1.1 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.53 45.0 3.75e-01 100.0% 58.9%
4298891 4121.1.1.2 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like 0.53 46.0 2.90e-01 100.0% 29.6%
3501768 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.52 42.0 3.86e-01 100.0% 80.0%
4463006 3115.2.1.0 ↗ a+b two layers › GP2-like › GP2 › GP2 0.52 44.0 4.49e-01 93.6% 97.8%
4951717 3115.1.1.0 ↗ a+b two layers › GP2-like › RplX-like › RplX-like 0.52 42.0 3.76e-01 100.0% 94.7%
3413058 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.52 44.0 3.64e-01 100.0% 62.2%
5065792 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.51 40.0 2.99e-01 100.0% 31.0%
1072940 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.50 40.0 2.59e-01 100.0% 16.8%
3264847 2492.1.1.36 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › ODR4-like 0.50 44.0 2.84e-01 97.9% 82.9%
3710757 304.163.1.1 ↗ a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 0.50 40.0 3.70e-01 100.0% 100.0%