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SRR1747055_scaffold_2_prodigal-single.1__X__X__00167
Bact-VirSRR1747055_scaffold_2_prodigal-single.1__X__X__00167
Identity
- Kingdom:
- phage
Quality
84.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 316-364
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h0dB02 | 1.10.1200.150 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Transcriptional repressor of class III stress genes, C-terminal domain | 0.62 | 52.0 | 4.45e-01 | 95.9% | 72.8% |
| 2hmcA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 44.0 | 2.72e-01 | 77.6% | 27.7% |
| 6j09A01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.59 | 47.0 | 4.32e-01 | 100.0% | 68.7% |
| 1lp1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.57 | 47.0 | 4.55e-01 | 95.9% | 89.1% |
| 7eebI01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.55 | 45.0 | 3.28e-01 | 100.0% | 30.8% |
| 4bzaA03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.55 | 42.0 | 3.72e-01 | 100.0% | 57.0% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3878171 | 105.1.1.1 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain › HLH | 0.73 | 52.0 | 4.71e-01 | 95.9% | 56.9% |
| 3704159 | 108.1.1.28 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 | 0.66 | 56.0 | 4.84e-01 | 100.0% | 66.3% |
| 4015072 | 4096.1.1.0 ↗ | a+b two layers › NAP-like › NAP-like › NAP-like | 0.65 | 48.0 | 3.40e-01 | 77.6% | 29.0% |
| 3993593 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.63 | 54.0 | 4.99e-01 | 100.0% | 80.0% |
| 3257606 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.61 | 51.0 | 4.86e-01 | 95.9% | 91.7% |
| 3629072 | 108.1.1.21 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › SPARC_Ca_bdg | 0.61 | 51.0 | 4.56e-01 | 93.9% | 92.9% |
| 3410637 | 105.1.1.1 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain › HLH | 0.61 | 51.0 | 4.42e-01 | 95.9% | 61.3% |
| 3708905 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.60 | 42.0 | 3.30e-01 | 75.5% | 61.7% |
| 3791538 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.59 | 49.0 | 3.94e-01 | 100.0% | 48.2% |
| 3993092 | 103.1.1.143 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_ARIH2_N | 0.59 | 46.0 | 4.81e-01 | 98.0% | 97.8% |
| 4947738 | 632.3.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain | 0.59 | 50.0 | 4.98e-01 | 95.9% | 96.0% |
| 3782066 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 47.0 | 2.81e-01 | 98.0% | 29.8% |
| 3624123 | 108.1.1.101 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_7, EF-hand_8 | 0.57 | 45.0 | 4.22e-01 | 100.0% | 75.7% |
| 3824883 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.54 | 44.0 | 3.82e-01 | 100.0% | 64.7% |
| 4025496 | 108.1.1.101 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_7, EF-hand_8 | 0.53 | 42.0 | 3.87e-01 | 95.9% | 68.6% |
D2
medium
residues 114-202
Domain cluster:
rep: MF403008.1__AUZ95146.1__X__00387__D1-95
D3
medium
residues 203-291
Domain cluster:
rep: MF403008.1__AUZ95146.1__X__00387__D1-95
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7cgfA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.73 | 65.0 | 4.39e-01 | 100.0% | 49.3% |
| 1rz4A01 | 1.25.40.250 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat; domain 1 | 0.69 | 55.0 | 5.01e-01 | 86.5% | 86.7% |
| 1hxiA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.65 | 47.0 | 4.42e-01 | 76.4% | 79.5% |
| 4epzA00 | 1.25.40.810 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ | 0.57 | 45.0 | 3.86e-01 | 88.8% | 94.8% |
| 1urvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 31.0 | 2.64e-01 | 95.5% | 30.5% |
| 3m71A00 | 1.50.10.150 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Voltage-dependent anion channel | 0.53 | 43.0 | 3.09e-01 | 93.3% | 51.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3256165 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 58.0 | 4.02e-01 | 100.0% | 66.8% |
| 3818643 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.60 | 49.0 | 4.46e-01 | 92.1% | 86.4% |
| 3510668 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 44.0 | 3.77e-01 | 80.9% | 63.9% |
| 3265012 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 51.0 | 3.94e-01 | 100.0% | 64.2% |
| 4507233 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 47.0 | 4.21e-01 | 93.3% | 92.3% |
| 1146575 | 109.39.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › transcription anti-terminator antagonist UpxZ › transcription anti-terminator antagonist UpxZ › UpxZ | 0.57 | 45.0 | 3.86e-01 | 88.8% | 94.8% |
| 3562126 | 145.1.1.2 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › Elongin_A | 0.53 | 42.0 | 4.08e-01 | 89.9% | 81.9% |
| 5053506 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.52 | 38.0 | 3.62e-01 | 76.4% | 71.4% |
| 5018508 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 39.0 | 3.90e-01 | 82.0% | 100.0% |
| 4994397 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.51 | 37.0 | 3.39e-01 | 77.5% | 64.2% |
| 3208161 | 176.1.1.1 ↗ | alpha arrays › Annexin › Annexin › Annexin › Annexin | 0.51 | 36.0 | 3.76e-01 | 76.4% | 89.4% |