←Back to structures
SRR1747055_scaffold_2_prodigal-single.1__X__X__00287
Bact-VirSRR1747055_scaffold_2_prodigal-single.1__X__X__00287
Identity
- Kingdom:
- phage
Quality
67.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-62
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3knwB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.71 | 64.0 | 4.36e-01 | 100.0% | 66.1% |
| 1llmD02 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.62 | 55.0 | 5.42e-01 | 92.5% | 92.7% |
| 7k9cA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 36.0 | 3.08e-01 | 77.4% | 33.7% |
| 2mdfA00 | 6.10.140.1330 | Special › Helix non-globular › Helix Hairpins › | 0.61 | 41.0 | 4.03e-01 | 75.5% | 64.9% |
| 5kfnA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.56 | 44.0 | 3.10e-01 | 88.7% | 30.5% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3364606 | 3939.1.1.66 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › VPS51_Exo84_N | 0.66 | 60.0 | 4.81e-01 | 100.0% | 54.0% |
| None | — | 0.66 | 57.0 | 3.31e-01 | 100.0% | 11.6% |