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SRR1747056_scaffold_0_curated_closed_gap_prodigal-single.1__X__X__00213
Bact-VirSRR1747056_scaffold_0_curated_closed_gap_prodigal-single.1__X__X__00213
Identity
- Kingdom:
- phage
Quality
65.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-111
D2
high
residues 166-346
Domain cluster:
rep: SRR1747065_scaffold_28_prodigal-single.1__X__X__00115__D47-262
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5gkdA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.77 | 73.0 | 6.16e-01 | 100.0% | 85.6% |
| 3n6zA01 | 2.160.20.110 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.75 | 70.0 | 6.06e-01 | 99.4% | 99.2% |
| 2pygA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 71.0 | 5.43e-01 | 100.0% | 64.4% |
| 1qjvA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 69.0 | 5.47e-01 | 100.0% | 89.5% |
| 1gq8A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.72 | 67.0 | 5.50e-01 | 100.0% | 75.8% |
| 3vsvA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.71 | 67.0 | 4.75e-01 | 100.0% | 90.0% |
| 1dabA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.71 | 68.0 | 4.69e-01 | 100.0% | 51.8% |
| 5c1cA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.70 | 65.0 | 5.45e-01 | 100.0% | 77.6% |
| 1clwA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.67 | 62.0 | 4.36e-01 | 99.4% | 59.7% |
| 1k4zA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.63 | 51.0 | 5.46e-01 | 99.4% | 96.8% |
| 3h09B02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.63 | 59.0 | 4.22e-01 | 99.4% | 45.9% |
| 3syjA02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.62 | 58.0 | 3.91e-01 | 99.4% | 49.8% |
| 2b0rB00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.62 | 49.0 | 5.21e-01 | 89.0% | 93.7% |
| 1k8fA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.60 | 49.0 | 5.24e-01 | 96.7% | 98.7% |
| 1af0A01 | 2.150.10.10 | Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal | 0.51 | 45.0 | 4.18e-01 | 97.8% | 89.4% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4981810 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.80 | 67.0 | 6.24e-01 | 97.8% | 73.0% |
| 4937200 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.78 | 55.0 | 6.01e-01 | 91.2% | 86.7% |
| 3712765 | 207.2.1.50 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › DGF-1_beta-sheet | 0.73 | 69.0 | 5.35e-01 | 100.0% | 80.3% |
| 3429156 | 207.2.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 | 0.72 | 68.0 | 5.45e-01 | 100.0% | 77.0% |
| 3785316 | 207.4.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like | 0.71 | 50.0 | 5.77e-01 | 96.7% | 100.0% |
| 5049574 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.66 | 61.0 | 5.56e-01 | 97.2% | 86.1% |
| 3305986 | 208.7.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein | 0.65 | 41.0 | 4.94e-01 | 94.5% | 97.4% |
| 4029787 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.64 | 51.0 | 4.68e-01 | 100.0% | 64.3% |
| 3732044 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.60 | 53.0 | 4.88e-01 | 96.7% | 99.1% |
| 3940754 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.60 | 55.0 | 4.68e-01 | 99.4% | 70.5% |
| 4403905 | 207.2.1.49 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › PATR | 0.58 | 53.0 | 4.83e-01 | 98.9% | 96.7% |
| 3198659 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.58 | 53.0 | 4.93e-01 | 100.0% | 93.9% |
| 4581394 | 207.6.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind,HCBP_related | 0.55 | 49.0 | 4.80e-01 | 100.0% | 89.0% |