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SRR1747057_scaffold_1_prodigal-single.1__X__X__00002
Bact-VirSRR1747057_scaffold_1_prodigal-single.1__X__X__00002
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 44-121
Domain cluster:
rep: BC_09192017_0_5m_scaffold_0_prodigal-single.1__X__X__00101__D26-133
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vlgC00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 33.0 | 3.06e-01 | 76.9% | 41.2% |
| 3e8tA00 | 3.15.10.30 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain | 0.57 | 39.0 | 2.88e-01 | 73.1% | 31.9% |
| 4kghA00 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.55 | 38.0 | 2.89e-01 | 73.1% | 30.1% |
| 1qz5A03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 41.0 | 3.69e-01 | 100.0% | 59.3% |
| 1kiaA01 | 3.30.46.10 | Alpha Beta › 2-Layer Sandwich › Glycine N-methyltransferase; chain A, domain 1 › Glycine N-methyltransferase, chain A, domain 1 | 0.53 | 30.0 | 3.02e-01 | 70.5% | 49.4% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5029920 | 4100.1.1.3 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox | 0.82 | 49.0 | 5.33e-01 | 100.0% | 72.3% |
| 3704402 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.77 | 55.0 | 4.74e-01 | 94.9% | 50.4% |
| 4948406 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.77 | 50.0 | 5.52e-01 | 98.7% | 82.5% |
| 3599937 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.75 | 55.0 | 5.02e-01 | 94.9% | 60.0% |
| 3641570 | 3131.1.1.1 ↗ | a+b two layers › FYR domain › FYR domain › FYR domain › FYRN,FYRC | 0.71 | 46.0 | 3.66e-01 | 96.2% | 34.0% |
| 3667413 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 34.0 | 3.46e-01 | 73.1% | 53.3% |
| 3623409 | 11.1.5.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › T-box | 0.59 | 41.0 | 3.10e-01 | 73.1% | 59.0% |
| 3797440 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.58 | 40.0 | 3.06e-01 | 73.1% | 59.0% |
| 1721555 | 11.1.4.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TTR-52 | 0.55 | 43.0 | 3.76e-01 | 85.9% | 73.2% |
| 5001274 | 512.1.1.0 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) | 0.54 | 46.0 | 3.85e-01 | 100.0% | 56.2% |
| 3724001 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.53 | 36.0 | 3.15e-01 | 100.0% | 43.8% |
| 4452393 | 304.112.1.10 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain › Med13_N | 0.53 | 33.0 | 3.01e-01 | 76.9% | 45.7% |
| 3733891 | 5.1.4.276 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR75_2nd | 0.52 | 44.0 | 2.76e-01 | 97.4% | 30.0% |
| 3787279 | 633.23.1.9 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 | 0.51 | 35.0 | 2.41e-01 | 80.8% | 19.6% |
| 3477153 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 33.0 | 3.25e-01 | 73.1% | 61.2% |
| 3278670 | 230.1.1.1 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › Uricase | 0.51 | 44.0 | 3.67e-01 | 98.7% | 58.6% |
| 3803126 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.50 | 29.0 | 2.86e-01 | 70.5% | 47.1% |
| 4929184 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 37.0 | 3.09e-01 | 100.0% | 41.3% |