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SRR1747057_scaffold_1_prodigal-single.1__X__X__00010
Bact-VirSRR1747057_scaffold_1_prodigal-single.1__X__X__00010
Identity
- Kingdom:
- phage
Quality
61.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-66
Domain cluster:
representative
CATH (53)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dcnA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.70 | 53.0 | 5.12e-01 | 95.3% | 72.2% |
| 6rxaA01 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.70 | 55.0 | 5.02e-01 | 100.0% | 64.4% |
| 1tj7A03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.67 | 52.0 | 5.04e-01 | 89.1% | 76.1% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.67 | 54.0 | 4.58e-01 | 100.0% | 52.7% |
| 4lzjA02 | 1.10.8.1080 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.66 | 43.0 | 4.03e-01 | 98.4% | 54.4% |
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.66 | 52.0 | 4.63e-01 | 100.0% | 59.8% |
| 4yosA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 52.0 | 4.04e-01 | 100.0% | 37.5% |
| 2aplA01 | 1.10.8.330 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PG0816-like | 0.65 | 56.0 | 5.48e-01 | 93.8% | 89.7% |
| 5xs2B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 53.0 | 4.21e-01 | 100.0% | 43.9% |
| 2kruA01 | 1.10.8.550 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B | 0.64 | 46.0 | 5.02e-01 | 93.8% | 96.2% |
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.64 | 52.0 | 4.16e-01 | 100.0% | 44.4% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.63 | 52.0 | 4.09e-01 | 90.6% | 87.3% |
| 1n5uA04 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.63 | 50.0 | 4.58e-01 | 100.0% | 65.1% |
| 1zv1A00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.63 | 44.0 | 4.57e-01 | 92.2% | 81.4% |
| 2lyiA01 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.63 | 51.0 | 4.03e-01 | 95.3% | 79.1% |
| 7wd3A04 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 56.0 | 5.26e-01 | 100.0% | 84.6% |
| 1aisB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.62 | 49.0 | 4.35e-01 | 100.0% | 58.6% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.62 | 49.0 | 4.48e-01 | 100.0% | 65.1% |
| 1td6A03 | 1.10.472.40 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Hypothetical protein mg237 homolog; domain 3 | 0.62 | 47.0 | 4.22e-01 | 95.3% | 57.6% |
| 3nz4B03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.61 | 43.0 | 3.65e-01 | 73.4% | 91.3% |
| 3h4cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.61 | 50.0 | 4.45e-01 | 100.0% | 61.5% |
| 3d8bB02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 53.0 | 4.94e-01 | 100.0% | 90.2% |
| 3a8rA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.60 | 53.0 | 4.42e-01 | 100.0% | 58.4% |
| 2ffjA01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.60 | 45.0 | 4.77e-01 | 95.3% | 94.6% |
| 6fakA02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.60 | 49.0 | 4.54e-01 | 96.9% | 70.4% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.60 | 51.0 | 4.08e-01 | 100.0% | 80.0% |
| 2dznF00 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.60 | 50.0 | 4.87e-01 | 100.0% | 85.5% |
| 3f2eA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 44.0 | 4.09e-01 | 81.2% | 95.2% |
| 5ceeA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 49.0 | 3.48e-01 | 100.0% | 92.2% |
| 5ubvA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.59 | 50.0 | 4.89e-01 | 100.0% | 85.9% |
| 2mqaA00 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.59 | 47.0 | 3.92e-01 | 96.9% | 47.2% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.59 | 50.0 | 4.33e-01 | 96.9% | 97.1% |
| 1w5sA01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.59 | 50.0 | 4.56e-01 | 98.4% | 71.6% |
| 1gq2A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 48.0 | 3.23e-01 | 100.0% | 81.0% |
| 2i53A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.58 | 51.0 | 3.98e-01 | 100.0% | 76.2% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.58 | 48.0 | 4.15e-01 | 96.9% | 57.5% |
| 2qdjA03 | 1.10.472.140 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.58 | 40.0 | 3.28e-01 | 71.9% | 79.3% |
| 1nklA00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.58 | 37.0 | 3.52e-01 | 71.9% | 53.8% |
| 1jkwA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 47.0 | 4.20e-01 | 100.0% | 62.4% |
| 2g8lB01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.57 | 45.0 | 4.51e-01 | 92.2% | 86.6% |
| 1kxpD03 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.56 | 46.0 | 4.20e-01 | 100.0% | 65.9% |
| 3djbA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.56 | 44.0 | 3.93e-01 | 87.5% | 96.9% |
| 4uobA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.56 | 44.0 | 3.62e-01 | 100.0% | 44.4% |
| 1vplA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 47.0 | 3.21e-01 | 95.3% | 26.1% |
| 1ujnA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.56 | 48.0 | 3.59e-01 | 96.9% | 61.9% |
| 3cxbA03 | 1.10.1740.30 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain | 0.56 | 48.0 | 4.52e-01 | 100.0% | 80.2% |
| 2iw3A02 | 1.20.1390.20 | Mainly Alpha › Up-down Bundle › PWI domain › | 0.55 | 46.0 | 4.15e-01 | 92.2% | 74.4% |
| 3k1rA01 | 1.20.1160.20 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › | 0.55 | 42.0 | 3.94e-01 | 82.8% | 97.5% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 46.0 | 4.28e-01 | 98.4% | 90.2% |
| 5cbgA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 42.0 | 3.65e-01 | 92.2% | 79.4% |
| 2kjgA00 | 1.20.120.970 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.51 | 36.0 | 3.24e-01 | 85.9% | 49.5% |
| 6mh4A03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.51 | 44.0 | 4.17e-01 | 100.0% | 89.9% |
| 3fvvA02 | 1.20.1440.100 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › SG protein - dephosphorylation function | 0.50 | 39.0 | 3.72e-01 | 87.5% | 72.0% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4626373 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.70 | 57.0 | 4.89e-01 | 95.3% | 55.2% |
| 3213401 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.70 | 58.0 | 5.24e-01 | 100.0% | 66.7% |
| 3796068 | 148.1.3.40 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ORC5_lid | 0.70 | 61.0 | 5.40e-01 | 100.0% | 68.4% |
| 4388170 | 103.1.1.6 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C | 0.70 | 52.0 | 5.38e-01 | 98.4% | 86.7% |
| 4976224 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.69 | 54.0 | 4.81e-01 | 100.0% | 57.9% |
| 4466734 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.69 | 56.0 | 4.66e-01 | 95.3% | 50.4% |
| 5070580 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.66 | 51.0 | 5.29e-01 | 95.3% | 94.9% |
| 3890040 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.65 | 53.0 | 4.15e-01 | 100.0% | 41.4% |
| 3740448 | 101.1.10.33 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Rrn7_cyclin_C | 0.65 | 46.0 | 4.23e-01 | 96.9% | 56.5% |
| 3704554 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.65 | 54.0 | 4.96e-01 | 98.4% | 86.4% |
| 4253183 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.65 | 51.0 | 5.15e-01 | 87.5% | 89.2% |
| 4955004 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.65 | 53.0 | 5.45e-01 | 96.9% | 96.7% |
| 5029464 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.64 | 53.0 | 4.96e-01 | 96.9% | 75.0% |
| 4204245 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.64 | 55.0 | 3.29e-01 | 95.3% | 24.8% |
| 3777646 | 101.1.10.13 ↗ | alpha arrays › HTH › HTH › Cyclin-like › DUF3452 | 0.64 | 51.0 | 3.86e-01 | 100.0% | 35.0% |
| 3998880 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 55.0 | 4.84e-01 | 96.9% | 92.6% |
| 5016525 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.64 | 49.0 | 4.64e-01 | 100.0% | 68.8% |
| 4978149 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.64 | 50.0 | 4.49e-01 | 100.0% | 61.1% |
| 4939237 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.64 | 50.0 | 5.04e-01 | 96.9% | 86.2% |
| 4148498 | 103.1.1.6 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C | 0.63 | 46.0 | 4.97e-01 | 100.0% | 100.0% |
| 4974459 | 4009.1.1.1 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom | 0.63 | 50.0 | 4.93e-01 | 96.9% | 80.0% |
| 3574087 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.63 | 49.0 | 4.36e-01 | 100.0% | 57.6% |
| 3833444 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.63 | 51.0 | 4.23e-01 | 100.0% | 48.3% |
| 5078120 | 4009.1.1.1 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom | 0.62 | 50.0 | 4.92e-01 | 96.9% | 81.4% |
| 3651184 | 4957.1.1.7 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit › MOM1 | 0.62 | 50.0 | 4.76e-01 | 100.0% | 76.0% |
| 3814488 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.62 | 52.0 | 4.42e-01 | 96.9% | 55.5% |
| 3601711 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.62 | 48.0 | 3.33e-01 | 84.4% | 78.2% |
| 140810 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.62 | 52.0 | 3.86e-01 | 98.4% | 34.6% |
| 4999074 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.62 | 50.0 | 4.78e-01 | 98.4% | 76.0% |
| 4125952 | 602.1.1.0 ↗ | alpha arrays › L-aspartase middle domain-like › L-aspartase middle domain-like › L-aspartase middle domain-like | 0.62 | 53.0 | 3.31e-01 | 95.3% | 73.1% |
| 2946 | 4979.1.1.1 ↗ | alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › C-terminal domain of Hypothetical protein MPN330 › C-terminal domain of Hypothetical protein MPN330 › DUF3196 | 0.62 | 47.0 | 4.22e-01 | 95.3% | 57.6% |
| 3278005 | 142.1.1.7 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Phosphatase-like_N | 0.61 | 50.0 | 5.05e-01 | 95.3% | 95.4% |
| 4585171 | 103.1.1.6 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C | 0.61 | 47.0 | 4.95e-01 | 100.0% | 98.2% |
| 4453955 | 4230.1.1.3 ↗ | alpha arrays › DnaD domain › DnaD domain › DnaD domain › DnaB_2 | 0.61 | 53.0 | 4.29e-01 | 98.4% | 68.8% |
| 4968425 | 4009.1.1.1 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom | 0.61 | 49.0 | 4.83e-01 | 96.9% | 82.9% |
| 5064035 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.61 | 48.0 | 5.01e-01 | 93.8% | 93.3% |
| 3889356 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.61 | 51.0 | 3.44e-01 | 100.0% | 24.7% |
| 3618000 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.60 | 45.0 | 4.17e-01 | 81.2% | 63.5% |
| 4969272 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.60 | 48.0 | 4.03e-01 | 100.0% | 48.3% |
| 4946843 | 4009.1.1.1 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom | 0.60 | 48.0 | 4.87e-01 | 96.9% | 87.7% |
| 5066642 | 4009.1.1.1 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom | 0.60 | 47.0 | 4.59e-01 | 98.4% | 80.0% |
| 4988064 | 4009.1.1.1 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom | 0.60 | 48.0 | 4.71e-01 | 92.2% | 82.9% |
| 4948164 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.59 | 52.0 | 3.94e-01 | 100.0% | 67.5% |
| 5003875 | 4009.1.1.1 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom | 0.59 | 48.0 | 4.85e-01 | 95.3% | 90.8% |
| 5082367 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.59 | 48.0 | 4.79e-01 | 93.8% | 89.2% |
| 4999090 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.59 | 49.0 | 4.05e-01 | 98.4% | 75.4% |
| 5034808 | 4009.1.1.1 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom | 0.59 | 47.0 | 4.66e-01 | 96.9% | 81.4% |
| 1821908 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.59 | 46.0 | 3.74e-01 | 98.4% | 43.2% |
| 4591229 | 190.1.1.8 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › NUT | 0.59 | 49.0 | 4.37e-01 | 100.0% | 64.2% |
| 5073287 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.59 | 50.0 | 3.75e-01 | 98.4% | 82.9% |
| 3344342 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.58 | 49.0 | 4.23e-01 | 100.0% | 86.4% |
| 3953241 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.58 | 47.0 | 3.36e-01 | 95.3% | 90.9% |
| 5076000 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.58 | 46.0 | 4.56e-01 | 92.2% | 81.4% |
| 4018670 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.58 | 50.0 | 4.30e-01 | 98.4% | 89.5% |
| 3597686 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.58 | 47.0 | 4.37e-01 | 100.0% | 92.2% |
| 3605664 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.57 | 49.0 | 3.14e-01 | 100.0% | 55.2% |
| 3818442 | 509.1.1.1 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH | 0.57 | 39.0 | 3.68e-01 | 71.9% | 78.8% |
| 3253035 | 2485.1.1.51 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_14 | 0.57 | 49.0 | 3.22e-01 | 98.4% | 41.1% |
| 4985470 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.57 | 46.0 | 4.47e-01 | 96.9% | 81.4% |
| 4961860 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.56 | 47.0 | 3.77e-01 | 98.4% | 50.7% |
| 4221251 | 1128.1.1.8 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › PF29574 | 0.56 | 48.0 | 4.38e-01 | 95.3% | 78.8% |
| 5004343 | 2498.5.1.0 ↗ | mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like | 0.55 | 46.0 | 4.13e-01 | 98.4% | 88.4% |
| 3814902 | 509.1.1.1 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH | 0.54 | 37.0 | 3.51e-01 | 70.3% | 84.0% |
| 3304822 | 7018.1.1.2 ↗ | few secondary structure elements › gp76 helical domain › gp76 helical domain › gp76 helical domain › SAM_AAE17_18 | 0.54 | 41.0 | 3.84e-01 | 93.8% | 63.5% |
| 3793383 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.53 | 41.0 | 4.10e-01 | 98.4% | 80.0% |
| 4453428 | 1037.1.1.1 ↗ | alpha bundles › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › LGT | 0.53 | 47.0 | 3.08e-01 | 100.0% | 30.5% |
| 4994276 | 186.1.1.4 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 | 0.51 | 45.0 | 3.99e-01 | 96.9% | 95.6% |
D2
medium
residues 70-123