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SRR1747057_scaffold_1_prodigal-single.1__X__X__00149
Bact-VirSRR1747057_scaffold_1_prodigal-single.1__X__X__00149
Identity
- Kingdom:
- phage
Quality
89.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 37-166
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gw7A00 | 1.10.3210.50 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › | 0.79 | 63.0 | 5.26e-01 | 100.0% | 50.7% |
| 1u6zA03 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.73 | 68.0 | 6.54e-01 | 100.0% | 93.2% |
| 8gtzA03 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.68 | 64.0 | 5.64e-01 | 100.0% | 84.5% |
| 4mcwA02 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.68 | 63.0 | 5.48e-01 | 100.0% | 74.6% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.67 | 43.0 | 4.29e-01 | 90.8% | 62.7% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.66 | 48.0 | 5.09e-01 | 98.5% | 87.5% |
| 3nrwA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.66 | 45.0 | 4.91e-01 | 87.7% | 86.5% |
| 1f5qB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 45.0 | 4.85e-01 | 98.5% | 84.4% |
| 7jv7B01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.63 | 48.0 | 4.65e-01 | 100.0% | 71.2% |
| 1aisB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.63 | 43.0 | 4.75e-01 | 98.5% | 90.9% |
| 2q14B01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.62 | 57.0 | 4.69e-01 | 100.0% | 57.1% |
| 1jkwA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.61 | 44.0 | 4.03e-01 | 100.0% | 55.7% |
| 2i53A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.61 | 46.0 | 4.54e-01 | 100.0% | 73.4% |
| 6z4xA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.61 | 40.0 | 3.86e-01 | 100.0% | 56.1% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.60 | 47.0 | 4.62e-01 | 98.5% | 76.4% |
| 5xs2B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.60 | 46.0 | 4.62e-01 | 100.0% | 80.3% |
| 3nqwA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.60 | 52.0 | 4.70e-01 | 100.0% | 69.1% |
| 1c9bA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.59 | 40.0 | 4.29e-01 | 99.2% | 84.0% |
| 3r2cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.58 | 43.0 | 4.22e-01 | 77.7% | 94.9% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 38.0 | 4.32e-01 | 96.2% | 93.6% |
| 1tzvA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.56 | 42.0 | 4.12e-01 | 79.2% | 94.3% |
| 4bbrM00 | 1.10.472.170 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.54 | 35.0 | 3.10e-01 | 92.3% | 42.5% |
| 1kkhA01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.54 | 38.0 | 3.48e-01 | 88.5% | 53.6% |
| 1eyvB00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.53 | 39.0 | 3.93e-01 | 76.9% | 94.0% |
| 1ileA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.53 | 38.0 | 3.40e-01 | 74.6% | 66.0% |
| 5fgzA02 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.53 | 36.0 | 3.40e-01 | 70.0% | 85.3% |
| 6vxcA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.52 | 46.0 | 2.91e-01 | 100.0% | 74.5% |
| 4rflA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.52 | 46.0 | 4.05e-01 | 100.0% | 87.9% |
| 3o60A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 37.0 | 3.40e-01 | 75.4% | 76.4% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.52 | 30.0 | 3.33e-01 | 93.1% | 71.0% |
| 3f4mA00 | 1.20.1440.160 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like | 0.51 | 42.0 | 4.02e-01 | 90.0% | 93.5% |
| 1oshA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.51 | 46.0 | 3.92e-01 | 100.0% | 81.9% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4951316 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.78 | 75.0 | 6.31e-01 | 100.0% | 74.0% |
| 3943504 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.74 | 68.0 | 5.54e-01 | 100.0% | 55.7% |
| 5020337 | 131.1.1.15 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III | 0.74 | 69.0 | 5.96e-01 | 100.0% | 85.1% |
| 4365538 | 131.1.1.15 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III | 0.73 | 68.0 | 5.78e-01 | 100.0% | 81.0% |
| 4377027 | 131.1.1.15 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III | 0.72 | 67.0 | 5.89e-01 | 100.0% | 87.2% |
| 3260673 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.72 | 67.0 | 5.55e-01 | 100.0% | 63.2% |
| 4969504 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.71 | 67.0 | 5.98e-01 | 100.0% | 79.4% |
| 4160987 | 186.1.1.1 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_1 | 0.67 | 46.0 | 4.92e-01 | 86.2% | 81.8% |
| 3991359 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.66 | 47.0 | 4.58e-01 | 100.0% | 67.1% |
| 3469981 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.66 | 47.0 | 4.47e-01 | 100.0% | 62.7% |
| 3378930 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.66 | 43.0 | 4.45e-01 | 96.9% | 68.8% |
| 3733396 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.65 | 46.0 | 4.06e-01 | 100.0% | 50.3% |
| 3581844 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.65 | 48.0 | 4.63e-01 | 100.0% | 67.3% |
| None | — | 0.65 | 47.0 | 4.67e-01 | 99.2% | 70.7% | |
| 3938346 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.65 | 45.0 | 4.35e-01 | 98.5% | 63.4% |
| 3807187 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.64 | 47.0 | 4.46e-01 | 100.0% | 64.5% |
| 3727859 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.64 | 46.0 | 3.70e-01 | 100.0% | 37.4% |
| 3598971 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.63 | 44.0 | 4.35e-01 | 100.0% | 66.4% |
| 3100923 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.63 | 45.0 | 4.29e-01 | 100.0% | 61.5% |
| 3627307 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.63 | 45.0 | 4.10e-01 | 98.5% | 53.9% |
| 3724015 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.63 | 44.0 | 4.38e-01 | 100.0% | 67.9% |
| 3374895 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.62 | 44.0 | 4.39e-01 | 100.0% | 70.4% |
| 3926027 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.61 | 43.0 | 4.20e-01 | 100.0% | 64.8% |
| 1276625 | 101.1.10.2 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C_2 | 0.61 | 46.0 | 3.69e-01 | 100.0% | 38.8% |
| 4593678 | 101.1.10.2 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C_2 | 0.60 | 44.0 | 3.44e-01 | 98.5% | 34.1% |
| 5053418 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.60 | 38.0 | 4.33e-01 | 93.8% | 90.0% |
| 3526937 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.60 | 47.0 | 4.62e-01 | 100.0% | 77.1% |
| 4996071 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.59 | 38.0 | 4.34e-01 | 93.8% | 91.1% |
| 5000679 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.59 | 42.0 | 4.52e-01 | 98.5% | 86.4% |
| 3641811 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.59 | 32.0 | 3.67e-01 | 81.5% | 72.2% |
| 3756619 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.58 | 46.0 | 4.38e-01 | 100.0% | 72.0% |
| 3582898 | 101.1.10.2 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C_2 | 0.57 | 44.0 | 3.37e-01 | 96.9% | 34.5% |
| 3231107 | 101.1.10.34 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N+CycT2-like_C | 0.57 | 45.0 | 3.51e-01 | 100.0% | 37.9% |
| 3190354 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.57 | 45.0 | 4.33e-01 | 100.0% | 73.3% |
| 3213223 | 101.1.10.2 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C_2 | 0.56 | 45.0 | 3.43e-01 | 96.9% | 35.6% |
| 3923604 | 101.1.10.14 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C_2 | 0.56 | 44.0 | 3.45e-01 | 100.0% | 37.6% |
| 3443564 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.56 | 45.0 | 4.25e-01 | 100.0% | 71.2% |
| 3931221 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.55 | 44.0 | 4.10e-01 | 97.7% | 67.9% |
| 3647820 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.55 | 45.0 | 4.07e-01 | 99.2% | 64.6% |
| 4023031 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.54 | 47.0 | 4.28e-01 | 100.0% | 70.9% |
| 4182059 | 621.1.1.3 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Sey1_3HB | 0.53 | 35.0 | 3.79e-01 | 80.8% | 78.2% |
| 3581236 | 160.1.1.0 ↗ | alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase | 0.51 | 33.0 | 2.97e-01 | 88.5% | 44.9% |
| 3611030 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.51 | 44.0 | 3.22e-01 | 95.4% | 72.3% |
| 3742639 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.51 | 42.0 | 4.08e-01 | 100.0% | 80.0% |