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SRR1747057_scaffold_1_prodigal-single.1__X__X__00163
Bact-VirSRR1747057_scaffold_1_prodigal-single.1__X__X__00163
Identity
- Kingdom:
- phage
Quality
95.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-87
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4njhA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 60.0 | 4.45e-01 | 92.9% | 42.6% |
| 1mkyA03 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.50 | 34.0 | 3.35e-01 | 100.0% | 65.6% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4976404 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.74 | 63.0 | 4.37e-01 | 91.8% | 39.2% |
| 4936106 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.73 | 59.0 | 4.35e-01 | 98.8% | 33.9% |
| 4449629 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.71 | 61.0 | 4.53e-01 | 94.1% | 42.9% |
| 1954222 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.70 | 60.0 | 4.28e-01 | 94.1% | 32.8% |
| 4098501 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.70 | 59.0 | 4.25e-01 | 94.1% | 32.2% |
| 5027442 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.59 | 32.0 | 3.74e-01 | 92.9% | 75.0% |
| 4992159 | 327.18.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A | 0.57 | 36.0 | 3.94e-01 | 90.6% | 83.1% |
| 5057363 | 327.18.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A | 0.56 | 35.0 | 3.81e-01 | 90.6% | 77.9% |
| 3501901 | 2484.3.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › AMP_N | 0.55 | 42.0 | 3.36e-01 | 84.7% | 66.3% |
| 4954525 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.54 | 35.0 | 3.44e-01 | 100.0% | 61.1% |
| 5045447 | 327.18.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A | 0.53 | 35.0 | 3.78e-01 | 100.0% | 81.4% |
| 3594135 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.53 | 36.0 | 3.45e-01 | 100.0% | 60.0% |
| 3992118 | 2484.3.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › AMP_N | 0.52 | 38.0 | 3.08e-01 | 76.5% | 87.1% |
| 3493374 | 2484.3.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › AMP_N | 0.50 | 39.0 | 3.07e-01 | 84.7% | 70.8% |
| 3392862 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.50 | 34.0 | 3.24e-01 | 100.0% | 56.4% |
| 3254388 | 232.1.1.6 ↗ | a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › DDAH_eukar | 0.50 | 39.0 | 2.73e-01 | 100.0% | 23.4% |