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SRR1747057_scaffold_1_prodigal-single.1__X__X__00210
Bact-VirSRR1747057_scaffold_1_prodigal-single.1__X__X__00210
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-79
Domain cluster:
rep: SCNpilot_BF_INOC_scaffold_63_prodigal-single.1__X__X__00498__D1-57
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zbdB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.69 | 48.0 | 4.04e-01 | 73.6% | 47.2% |
| 1wfkA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 45.0 | 4.39e-01 | 72.2% | 79.2% |
| 5tdrA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 35.0 | 3.62e-01 | 86.1% | 65.7% |
| 3o70A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 38.0 | 4.32e-01 | 72.2% | 94.5% |
| 8eb0A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 46.0 | 4.32e-01 | 88.9% | 80.2% |
| 4uf0A03 | 2.10.110.20 | Mainly Beta › Ribbon › Cysteine Rich Protein › | 0.54 | 37.0 | 3.83e-01 | 80.6% | 76.9% |
| 1wimA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 47.0 | 4.29e-01 | 98.6% | 79.8% |
| 2ewlA00 | 3.30.160.330 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 30.0 | 3.29e-01 | 86.1% | 71.4% |
| 7yuiB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 43.0 | 4.04e-01 | 93.1% | 83.0% |
| 5jxsA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.50 | 37.0 | 3.03e-01 | 79.2% | 59.2% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3397474 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.83 | 46.0 | 6.07e-01 | 88.9% | 100.0% |
| 4957868 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.73 | 37.0 | 5.00e-01 | 90.3% | 100.0% |
| 3733728 | 376.1.3.31 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf-4CXXC_R1 | 0.70 | 44.0 | 4.23e-01 | 86.1% | 56.2% |
| 3472338 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.69 | 47.0 | 5.16e-01 | 70.8% | 95.0% |
| 3478913 | 376.1.3.4 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE_2 | 0.68 | 47.0 | 4.43e-01 | 70.8% | 68.2% |
| 3715785 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.68 | 47.0 | 4.56e-01 | 70.8% | 88.6% |
| 3401103 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.65 | 45.0 | 3.97e-01 | 70.8% | 62.0% |
| 5061253 | 376.1.3.97 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › Prok-RING_2 | 0.64 | 44.0 | 4.25e-01 | 70.8% | 81.2% |
| 3739083 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.63 | 44.0 | 4.35e-01 | 70.8% | 88.0% |
| 4013051 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.62 | 53.0 | 5.03e-01 | 91.7% | 85.9% |
| 3703254 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.62 | 42.0 | 4.08e-01 | 70.8% | 86.3% |
| 4998890 | 377.1.1.7 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-dskA_traR | 0.61 | 38.0 | 4.62e-01 | 87.5% | 100.0% |
| 3301386 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.60 | 38.0 | 4.01e-01 | 86.1% | 72.3% |
| 3933206 | 376.1.3.56 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PF30811 | 0.59 | 41.0 | 3.89e-01 | 70.8% | 75.3% |
| 3822811 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.59 | 54.0 | 5.02e-01 | 100.0% | 84.4% |
| 3457996 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.59 | 52.0 | 4.38e-01 | 95.8% | 66.1% |
| 3431026 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.58 | 53.0 | 4.85e-01 | 100.0% | 84.2% |
| 3438007 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 51.0 | 4.67e-01 | 97.2% | 85.3% |
| 3255227 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.57 | 52.0 | 4.67e-01 | 97.2% | 80.0% |
| 3347344 | 386.1.1.26 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_6 | 0.57 | 30.0 | 3.18e-01 | 97.2% | 52.3% |
| 3714795 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.57 | 39.0 | 3.66e-01 | 70.8% | 68.9% |
| 3623406 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.57 | 49.0 | 4.45e-01 | 93.1% | 83.2% |
| 3342185 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.57 | 50.0 | 4.52e-01 | 94.4% | 75.8% |
| 3717337 | 376.1.1.165 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › FYVE | 0.56 | 37.0 | 3.69e-01 | 87.5% | 65.3% |
| 3498231 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 49.0 | 4.60e-01 | 93.1% | 84.7% |
| 3696220 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.55 | 47.0 | 3.98e-01 | 90.3% | 62.3% |
| 3828987 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.55 | 48.0 | 4.38e-01 | 94.4% | 77.9% |
| 3259913 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.55 | 47.0 | 4.64e-01 | 91.7% | 89.3% |
| 3702126 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.55 | 47.0 | 4.45e-01 | 91.7% | 85.9% |
| 4224759 | 304.48.1.89 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Csm1_B, Cas10-Cmr2_palm2 | 0.54 | 48.0 | 2.91e-01 | 97.2% | 15.1% |
| 3645751 | 633.26.1.0 ↗ | alpha bundles › Bromodomain-like › SidC lipid-binding domain › SidC lipid-binding domain | 0.54 | 47.0 | 3.73e-01 | 95.8% | 85.5% |
| 3636589 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 47.0 | 4.43e-01 | 98.6% | 82.2% |
| 3211768 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 45.0 | 3.95e-01 | 91.7% | 66.7% |
| 3231134 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.53 | 45.0 | 4.18e-01 | 91.7% | 94.4% |
| 4011643 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.51 | 41.0 | 3.85e-01 | 87.5% | 95.6% |