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SRR1747059_scaffold_20_prodigal-single.1__X__X__00010
Bact-VirSRR1747059_scaffold_20_prodigal-single.1__X__X__00010
Identity
- Kingdom:
- phage
Quality
71.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-42
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.55 | 38.0 | 2.52e-01 | 92.1% | 16.8% |
| 4m8dA00 | 3.50.30.50 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › Putative cyclase | 0.53 | 37.0 | 2.35e-01 | 78.9% | 50.4% |
| 6vtmB00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 40.0 | 3.21e-01 | 100.0% | 82.3% |
| 4lm6A00 | 3.90.510.10 | Alpha Beta › Alpha-Beta Complex › Cryptophytan Phycoerythrin (Alpha-1 Chain); Chain A › Phycoerythrin alpha chain | 0.50 | 35.0 | 3.20e-01 | 84.2% | 69.4% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3983259 | 109.4.1.1792 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF5682 | 0.54 | 44.0 | 2.62e-01 | 94.7% | 19.7% |
| 3615896 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.53 | 38.0 | 2.46e-01 | 81.6% | 58.5% |
| 3955550 | 3761.1.1.0 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related | 0.50 | 37.0 | 3.23e-01 | 100.0% | 85.0% |