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SRR1747059_scaffold_22_prodigal-single.1__X__X__00075

Bact-Vir

SRR1747059_scaffold_22_prodigal-single.1__X__X__00075

Identity

Kingdom:
phage

Quality

77.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 45-149
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3urgA01 6.10.140.400 Special › Helix non-globular › Helix Hairpins › 0.61 35.0 4.46e-01 78.1% 98.3%
4eqyA02 1.20.1180.10 Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain 0.59 38.0 4.44e-01 96.2% 98.6%
6ks6q01 1.10.560.10 Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain 0.55 46.0 3.48e-01 93.3% 50.2%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5042947 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.57 28.0 3.90e-01 92.4% 100.0%
3372494 109.4.1.1667 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30965 0.55 38.0 2.24e-01 71.4% 8.8%
5063526 3236.2.1.8 ↗ alpha complex topology › Cation-proton antiporter › Sodium-dependent citrate symporter › Sodium-dependent citrate symporter › Asp-Al_Ex 0.52 39.0 2.76e-01 80.0% 85.6%
4094229 208.1.1.25 ↗ beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Acetyltransf_11 0.51 42.0 3.16e-01 100.0% 36.5%
3682441 109.4.1.177 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cnd3 0.51 38.0 2.39e-01 82.9% 28.9%