Back to structures

SRR1747059_scaffold_22_prodigal-single.1__X__X__00167

Bact-Vir

SRR1747059_scaffold_22_prodigal-single.1__X__X__00167

Identity

Kingdom:
phage

Quality

80.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-57
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1s58A00 2.170.30.10 Mainly Beta › Beta Complex › Empty Capsid Viral Protein 2 › Parvovirus coat protein VP1/VP2 0.59 49.0 2.90e-01 96.5% 72.5%
1olzA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 45.0 2.78e-01 100.0% 47.8%
6ui4A01 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.55 39.0 3.48e-01 77.2% 97.7%
1d0nA05 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.52 35.0 3.03e-01 70.2% 94.8%
1hh2P03 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.51 30.0 2.72e-01 75.4% 40.5%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3476782 224.1.1.0 a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like 0.59 42.0 3.10e-01 77.2% 74.4%